Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL603908.1-201ENST00000406098 201 ntBASIC2.68□□□□□ -1.98
PROM1O43490 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.68□□□□□ -1.98
PROM1O43490 SUMO1P3-201ENST00000439961 304 ntBASIC2.68□□□□□ -1.98
PROM1O43490 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.68□□□□□ -1.98
PROM1O43490 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.68□□□□□ -1.98
PROM1O43490 RNA5SP367-201ENST00000516557 118 ntBASIC2.68□□□□□ -1.98
PROM1O43490 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.68□□□□□ -1.98
PROM1O43490 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.68□□□□□ -1.98
PROM1O43490 DEFB117-201ENST00000602356 141 ntBASIC2.68□□□□□ -1.98
PROM1O43490 AC068205.3-201ENST00000636385 468 ntBASIC2.68□□□□□ -1.98
PROM1O43490 AL136360.1-201ENST00000503377 1900 ntBASIC2.68□□□□□ -1.98
PROM1O43490 RNU6-486P-201ENST00000363116 107 ntBASIC2.67□□□□□ -1.98
PROM1O43490 VTRNA1-1-201ENST00000363120 99 ntBASIC2.67□□□□□ -1.98
PROM1O43490 Y_RNA.122-201ENST00000363331 96 ntBASIC2.67□□□□□ -1.98
PROM1O43490 MIR181A2-201ENST00000384863 110 ntBASIC2.67□□□□□ -1.98
PROM1O43490 RNU2-54P-201ENST00000410299 190 ntBASIC2.67□□□□□ -1.98
PROM1O43490 Y_RNA.597-201ENST00000410463 100 ntBASIC2.67□□□□□ -1.98
PROM1O43490 RNU6-1328P-201ENST00000410938 106 ntBASIC2.67□□□□□ -1.98
PROM1O43490 Y_RNA.626-201ENST00000411288 95 ntBASIC2.67□□□□□ -1.98
PROM1O43490 HMGN2P35-201ENST00000412164 270 ntBASIC2.67□□□□□ -1.98
PROM1O43490 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.67□□□□□ -1.98
PROM1O43490 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.67□□□□□ -1.98
PROM1O43490 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PROM1O43490 AC005828.6-201ENST00000606610 232 ntBASIC2.67□□□□□ -1.98
PROM1O43490 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.67□□□□□ -1.98
PROM1O43490 AC009487.2-201ENST00000420969 6821 ntBASIC2.67□□□□□ -1.98
PROM1O43490 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
PROM1O43490 UBE2WP1-201ENST00000362030 340 ntBASIC2.66□□□□□ -1.98
PROM1O43490 RNU6-1072P-201ENST00000384703 107 ntBASIC2.66□□□□□ -1.98
PROM1O43490 RNU6-443P-201ENST00000384780 107 ntBASIC2.66□□□□□ -1.98
PROM1O43490 MIR29B2-201ENST00000385055 81 ntBASIC2.66□□□□□ -1.98
PROM1O43490 AC009963.1-201ENST00000417265 157 ntBASIC2.66□□□□□ -1.98
PROM1O43490 RN7SL297P-201ENST00000483161 293 ntBASIC2.66□□□□□ -1.98
PROM1O43490 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.66□□□□□ -1.98
PROM1O43490 RNU5F-4P-201ENST00000516581 114 ntBASIC2.66□□□□□ -1.98
PROM1O43490 SCARNA3-201ENST00000517097 143 ntBASIC2.66□□□□□ -1.98
PROM1O43490 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.66□□□□□ -1.98
PROM1O43490 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
PROM1O43490 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PROM1O43490 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PROM1O43490 MIR26A1-201ENST00000362205 77 ntBASIC2.65□□□□□ -1.99
PROM1O43490 RNY4P28-201ENST00000365281 93 ntBASIC2.65□□□□□ -1.99
PROM1O43490 Y_RNA.555-201ENST00000384673 110 ntBASIC2.65□□□□□ -1.99
PROM1O43490 MIR218-1-201ENST00000384999 110 ntBASIC2.65□□□□□ -1.99
PROM1O43490 RNU6-1199P-201ENST00000411249 104 ntBASIC2.65□□□□□ -1.99
PROM1O43490 AC024067.1-201ENST00000426199 223 ntBASIC2.65□□□□□ -1.99
PROM1O43490 MTND2P29-201ENST00000438595 412 ntBASIC2.65□□□□□ -1.99
PROM1O43490 Y_RNA.638-201ENST00000459374 113 ntBASIC2.65□□□□□ -1.99
PROM1O43490 AC080013.2-201ENST00000460866 323 ntBASIC2.65□□□□□ -1.99
PROM1O43490 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.65□□□□□ -1.99
PROM1O43490 AC023141.11-201ENST00000508864 202 ntBASIC2.65□□□□□ -1.99
PROM1O43490 MIR449C-201ENST00000516047 92 ntBASIC2.65□□□□□ -1.99
PROM1O43490 AP002392.1-201ENST00000537692 208 ntBASIC2.65□□□□□ -1.99
PROM1O43490 AC004486.1-201ENST00000546846 233 ntBASIC2.65□□□□□ -1.99
PROM1O43490 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.65□□□□□ -1.99
PROM1O43490 FTX_2.1-201ENST00000618816 94 ntBASIC2.65□□□□□ -1.99
PROM1O43490 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PROM1O43490 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PROM1O43490 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
PROM1O43490 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PROM1O43490 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PROM1O43490 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PROM1O43490 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PROM1O43490 RNU4-82P-201ENST00000362443 140 ntBASIC2.64□□□□□ -1.99
PROM1O43490 RNU6-1305P-201ENST00000364353 104 ntBASIC2.64□□□□□ -1.99
PROM1O43490 Y_RNA.329-201ENST00000365209 107 ntBASIC2.64□□□□□ -1.99
PROM1O43490 RNU6-1062P-201ENST00000383908 107 ntBASIC2.64□□□□□ -1.99
PROM1O43490 RNA5SP504-201ENST00000410676 117 ntBASIC2.64□□□□□ -1.99
PROM1O43490 RNA5SP184-201ENST00000411071 108 ntBASIC2.64□□□□□ -1.99
PROM1O43490 AL135938.1-201ENST00000443141 297 ntBASIC2.64□□□□□ -1.99
PROM1O43490 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.64□□□□□ -1.99
PROM1O43490 AC003982.1-202ENST00000469928 248 ntBASIC2.64□□□□□ -1.99
PROM1O43490 RNU6-191P-201ENST00000516295 94 ntBASIC2.64□□□□□ -1.99
PROM1O43490 SNORA9.3-201ENST00000516383 129 ntBASIC2.64□□□□□ -1.99
PROM1O43490 MIR4319-201ENST00000577285 85 ntBASIC2.64□□□□□ -1.99
PROM1O43490 MIR4435-1-201ENST00000582552 80 ntBASIC2.64□□□□□ -1.99
PROM1O43490 MIR3670-2-201ENST00000582974 65 ntBASIC2.64□□□□□ -1.99
PROM1O43490 MIR3605-201ENST00000583214 100 ntBASIC2.64□□□□□ -1.99
PROM1O43490 MIR3670-1-201ENST00000584160 65 ntBASIC2.64□□□□□ -1.99
PROM1O43490 MIR3670-3-201ENST00000584855 65 ntBASIC2.64□□□□□ -1.99
PROM1O43490 ZNF861P-201ENST00000588126 639 ntBASIC2.64□□□□□ -1.99
PROM1O43490 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.64□□□□□ -1.99
PROM1O43490 AL365434.2-201ENST00000607979 234 ntBASIC2.64□□□□□ -1.99
PROM1O43490 MIR3670-4-201ENST00000612260 65 ntBASIC2.64□□□□□ -1.99
PROM1O43490 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.64□□□□□ -1.99
PROM1O43490 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PROM1O43490 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.64□□□□□ -1.99
PROM1O43490 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PROM1O43490 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PROM1O43490 Y_RNA.82-201ENST00000363000 102 ntBASIC2.63□□□□□ -1.99
PROM1O43490 Y_RNA.92-201ENST00000363043 102 ntBASIC2.63□□□□□ -1.99
PROM1O43490 RNU6-454P-201ENST00000364292 107 ntBASIC2.63□□□□□ -1.99
PROM1O43490 Y_RNA.235-201ENST00000364412 102 ntBASIC2.63□□□□□ -1.99
PROM1O43490 Y_RNA.306-201ENST00000365015 102 ntBASIC2.63□□□□□ -1.99
PROM1O43490 Y_RNA.312-201ENST00000365089 102 ntBASIC2.63□□□□□ -1.99
PROM1O43490 Y_RNA.322-201ENST00000365151 102 ntBASIC2.63□□□□□ -1.99
PROM1O43490 RNU6-220P-201ENST00000390919 107 ntBASIC2.63□□□□□ -1.99
PROM1O43490 MIR1261-201ENST00000408659 82 ntBASIC2.63□□□□□ -1.99
PROM1O43490 U3.40-201ENST00000408706 208 ntBASIC2.63□□□□□ -1.99
PROM1O43490 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms