Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MIR518A2-201ENST00000384966 87 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 MIR1185-2-201ENST00000408687 86 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 RNU4-53P-201ENST00000410828 140 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 AL390729.2-201ENST00000416137 156 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 AC113618.1-201ENST00000416747 285 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.62□□□□□ -1.99
PRPF3O43395 AC139712.2-201ENST00000424302 339 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.62□□□□□ -1.99
PRPF3O43395 MTND2P29-201ENST00000438595 412 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 RNU6-764P-201ENST00000516396 105 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 SNORA31.25-201ENST00000517242 134 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 AC018448.1-201ENST00000552843 316 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 MIR4659A-201ENST00000580269 81 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 AC005786.1-201ENST00000588553 154 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 U1.36-201ENST00000620684 176 ntBASIC2.62□□□□□ -1.99
PRPF3O43395 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.62□□□□□ -1.99
PRPF3O43395 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.61□□□□□ -1.99
PRPF3O43395 RNU6-23P-201ENST00000363283 107 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 RNU6-1164P-201ENST00000364428 107 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 SNORA63C-201ENST00000364578 129 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 Y_RNA.380-201ENST00000365663 111 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 Y_RNA.471-201ENST00000384312 102 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 Y_RNA.551-201ENST00000384661 102 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 RNA5SP475-201ENST00000410568 110 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 RNU6-625P-201ENST00000459412 107 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.61□□□□□ -1.99
PRPF3O43395 RNU6-237P-201ENST00000515985 71 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 Y_RNA.715-201ENST00000517082 110 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 AC113195.1-201ENST00000579952 141 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 AL360085.1-201ENST00000604713 532 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 AL353149.1-201ENST00000610667 244 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 AC011476.5-201ENST00000615594 130 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 AC240442.1-201ENST00000616055 283 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 AC006435.5-201ENST00000624486 112 ntBASIC2.61□□□□□ -1.99
PRPF3O43395 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PRPF3O43395 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PRPF3O43395 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
PRPF3O43395 MTND5P6-201ENST00000422338 1798 ntBASIC2.6□□□□□ -1.99
PRPF3O43395 RNU6-738P-201ENST00000384531 106 ntBASIC2.6□□□□□ -1.99
PRPF3O43395 MIR515-2-201ENST00000384883 83 ntBASIC2.6□□□□□ -1.99
PRPF3O43395 MIR515-1-201ENST00000384884 83 ntBASIC2.6□□□□□ -1.99
PRPF3O43395 MIR1252-201ENST00000408861 65 ntBASIC2.6□□□□□ -1.99
PRPF3O43395 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.6□□□□□ -1.99
PRPF3O43395 U8.20-201ENST00000459445 131 ntBASIC2.6□□□□□ -1.99
PRPF3O43395 SUMO2P18-201ENST00000518873 252 ntBASIC2.6□□□□□ -1.99
PRPF3O43395 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.6□□□□□ -1.99
PRPF3O43395 AL590808.1-201ENST00000618696 141 ntBASIC2.6□□□□□ -1.99
PRPF3O43395 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PRPF3O43395 Y_RNA.458-201ENST00000384240 102 ntBASIC2.59□□□□□ -1.99
PRPF3O43395 MIR221-201ENST00000385135 110 ntBASIC2.59□□□□□ -1.99
PRPF3O43395 MIR548B-201ENST00000385247 97 ntBASIC2.59□□□□□ -1.99
PRPF3O43395 SNORD23.1-201ENST00000408212 104 ntBASIC2.59□□□□□ -1.99
PRPF3O43395 ELOCP21-201ENST00000412558 336 ntBASIC2.59□□□□□ -1.99
PRPF3O43395 RPEP5-201ENST00000441137 268 ntBASIC2.59□□□□□ -1.99
PRPF3O43395 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.59□□□□□ -1.99
PRPF3O43395 RNU6-107P-201ENST00000516643 102 ntBASIC2.59□□□□□ -1.99
PRPF3O43395 RNU7-193P-201ENST00000516723 65 ntBASIC2.59□□□□□ -1.99
PRPF3O43395 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.59□□□□□ -1.99
PRPF3O43395 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.59□□□□□ -1.99
PRPF3O43395 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.59□□□□□ -1.99
PRPF3O43395 AC009831.4-201ENST00000620744 325 ntBASIC2.59□□□□□ -1.99
PRPF3O43395 Y_RNA.145-201ENST00000363527 102 ntBASIC2.58□□□□□ -2
PRPF3O43395 Y_RNA.152-201ENST00000363578 100 ntBASIC2.58□□□□□ -2
PRPF3O43395 RNA5SP493-201ENST00000364115 91 ntBASIC2.58□□□□□ -2
PRPF3O43395 RNU6-418P-201ENST00000384035 107 ntBASIC2.58□□□□□ -2
PRPF3O43395 Y_RNA.462-201ENST00000384268 102 ntBASIC2.58□□□□□ -2
PRPF3O43395 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
PRPF3O43395 SNORA11.4-201ENST00000408823 129 ntBASIC2.58□□□□□ -2
PRPF3O43395 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.58□□□□□ -2
PRPF3O43395 RNU6-408P-201ENST00000515910 100 ntBASIC2.58□□□□□ -2
PRPF3O43395 RNU6-327P-201ENST00000516270 127 ntBASIC2.58□□□□□ -2
PRPF3O43395 Y_RNA.720-201ENST00000517166 92 ntBASIC2.58□□□□□ -2
PRPF3O43395 RNU2-19P-201ENST00000517288 84 ntBASIC2.58□□□□□ -2
PRPF3O43395 AK6P2-201ENST00000549020 471 ntBASIC2.58□□□□□ -2
PRPF3O43395 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.58□□□□□ -2
PRPF3O43395 AC007229.1-201ENST00000590455 412 ntBASIC2.58□□□□□ -2
PRPF3O43395 MIR3674-201ENST00000636576 68 ntBASIC2.58□□□□□ -2
PRPF3O43395 AL159152.1-201ENST00000635019 2587 ntBASIC2.57□□□□□ -2
PRPF3O43395 RNU6-1240P-201ENST00000365155 104 ntBASIC2.57□□□□□ -2
PRPF3O43395 RNU11-5P-201ENST00000391216 129 ntBASIC2.57□□□□□ -2
PRPF3O43395 RNU6-57P-201ENST00000411348 103 ntBASIC2.57□□□□□ -2
PRPF3O43395 MTND2P23-201ENST00000422990 651 ntBASIC2.57□□□□□ -2
PRPF3O43395 AC010154.1-201ENST00000425857 269 ntBASIC2.57□□□□□ -2
PRPF3O43395 RAB28P5-201ENST00000427490 651 ntBASIC2.57□□□□□ -2
PRPF3O43395 IPO7P1-201ENST00000442031 636 ntBASIC2.57□□□□□ -2
PRPF3O43395 ATP5J2P3-201ENST00000451550 258 ntBASIC2.57□□□□□ -2
PRPF3O43395 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.57□□□□□ -2
PRPF3O43395 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.57□□□□□ -2
PRPF3O43395 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.57□□□□□ -2
PRPF3O43395 MIR3169-201ENST00000578032 83 ntBASIC2.57□□□□□ -2
PRPF3O43395 SNORD53-201ENST00000579969 78 ntBASIC2.57□□□□□ -2
PRPF3O43395 AC008737.2-201ENST00000599446 118 ntBASIC2.57□□□□□ -2
PRPF3O43395 AL355297.3-201ENST00000604082 446 ntBASIC2.57□□□□□ -2
PRPF3O43395 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
PRPF3O43395 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
PRPF3O43395 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PRPF3O43395 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.56□□□□□ -2
PRPF3O43395 MIR340-201ENST00000362125 95 ntBASIC2.56□□□□□ -2
PRPF3O43395 SNORD114-7-201ENST00000362520 77 ntBASIC2.56□□□□□ -2
PRPF3O43395 Y_RNA.153-201ENST00000363615 91 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms