Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNU1-101P-201ENST00000391171 127 ntBASIC4.16□□□□□ -1.74
HOXA2O43364 AL031121.1-201ENST00000406553 254 ntBASIC4.16□□□□□ -1.74
HOXA2O43364 Y_RNA.621-201ENST00000411065 96 ntBASIC4.16□□□□□ -1.74
HOXA2O43364 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA2O43364 AL035423.1-201ENST00000420331 213 ntBASIC4.16□□□□□ -1.74
HOXA2O43364 AC002075.2-201ENST00000425207 252 ntBASIC4.16□□□□□ -1.74
HOXA2O43364 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA2O43364 PPBPP1-201ENST00000510807 373 ntBASIC4.16□□□□□ -1.74
HOXA2O43364 RN7SKP18-201ENST00000516005 275 ntBASIC4.16□□□□□ -1.74
HOXA2O43364 AC244505.7-201ENST00000599675 272 ntBASIC4.16□□□□□ -1.74
HOXA2O43364 AC090115.4-201ENST00000609970 188 ntBASIC4.16□□□□□ -1.74
HOXA2O43364 AC009831.4-201ENST00000620744 325 ntBASIC4.16□□□□□ -1.74
HOXA2O43364 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA2O43364 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HOXA2O43364 SNORA14A-201ENST00000364773 135 ntBASIC4.15□□□□□ -1.75
HOXA2O43364 Y_RNA.328-201ENST00000365208 113 ntBASIC4.15□□□□□ -1.75
HOXA2O43364 MIR1253-201ENST00000408273 105 ntBASIC4.15□□□□□ -1.75
HOXA2O43364 RNA5SP104-201ENST00000410989 118 ntBASIC4.15□□□□□ -1.75
HOXA2O43364 RPS29P4-201ENST00000414733 161 ntBASIC4.15□□□□□ -1.75
HOXA2O43364 PRSS3P4-201ENST00000453323 162 ntBASIC4.15□□□□□ -1.75
HOXA2O43364 COX6CP6-201ENST00000490840 228 ntBASIC4.15□□□□□ -1.75
HOXA2O43364 AC096725.1-201ENST00000514266 313 ntBASIC4.15□□□□□ -1.75
HOXA2O43364 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.15□□□□□ -1.75
HOXA2O43364 U3.45-201ENST00000607547 219 ntBASIC4.15□□□□□ -1.75
HOXA2O43364 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HOXA2O43364 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
HOXA2O43364 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HOXA2O43364 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA2O43364 LINC02471-203ENST00000641941 4752 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA2O43364 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXA2O43364 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA2O43364 RNA5SP387-201ENST00000364226 106 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 SNORD73B-201ENST00000364394 72 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 Y_RNA.348-201ENST00000365403 103 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 SNORA51.5-201ENST00000384126 131 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HOXA2O43364 AC093578.1-201ENST00000415219 368 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 AL513477.1-202ENST00000417061 214 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 ARF4P2-201ENST00000430209 526 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 RPL23AP83-201ENST00000434984 473 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 RN7SL807P-201ENST00000470923 297 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXA2O43364 MRPS17P9-201ENST00000511924 393 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 RNA5SP490-201ENST00000517141 136 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXA2O43364 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXA2O43364 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXA2O43364 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 AL137067.1-201ENST00000615933 120 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA2O43364 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
HOXA2O43364 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HOXA2O43364 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA2O43364 AC068647.1-201ENST00000489539 2265 ntBASIC4.14□□□□□ -1.75
HOXA2O43364 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA2O43364 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
HOXA2O43364 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA2O43364 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA2O43364 RNA5SP72-201ENST00000364442 117 ntBASIC4.13□□□□□ -1.75
HOXA2O43364 U8.6-201ENST00000364939 135 ntBASIC4.13□□□□□ -1.75
HOXA2O43364 RNU6-294P-201ENST00000364999 102 ntBASIC4.13□□□□□ -1.75
HOXA2O43364 Y_RNA.333-201ENST00000365274 102 ntBASIC4.13□□□□□ -1.75
HOXA2O43364 SNORD24-201ENST00000383884 75 ntBASIC4.13□□□□□ -1.75
HOXA2O43364 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA2O43364 AC106707.2-201ENST00000484182 374 ntBASIC4.13□□□□□ -1.75
HOXA2O43364 IGLV3-26-201ENST00000520756 302 ntBASIC4.13□□□□□ -1.75
HOXA2O43364 AC022695.1-201ENST00000522089 237 ntBASIC4.13□□□□□ -1.75
HOXA2O43364 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA2O43364 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA2O43364 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
HOXA2O43364 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA2O43364 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXA2O43364 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXA2O43364 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXA2O43364 RNU6-640P-201ENST00000363693 105 ntBASIC4.12□□□□□ -1.75
HOXA2O43364 Y_RNA.242-201ENST00000364473 110 ntBASIC4.12□□□□□ -1.75
HOXA2O43364 MIR34B-201ENST00000385076 84 ntBASIC4.12□□□□□ -1.75
HOXA2O43364 RNU11-5P-201ENST00000391216 129 ntBASIC4.12□□□□□ -1.75
HOXA2O43364 HLA-N-201ENST00000437516 135 ntBASIC4.12□□□□□ -1.75
HOXA2O43364 HMGN2P18-201ENST00000450680 270 ntBASIC4.12□□□□□ -1.75
HOXA2O43364 AC010469.1-201ENST00000463864 576 ntBASIC4.12□□□□□ -1.75
HOXA2O43364 AC110768.1-201ENST00000509222 400 ntBASIC4.12□□□□□ -1.75
HOXA2O43364 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXA2O43364 RNU6-965P-201ENST00000516721 96 ntBASIC4.12□□□□□ -1.75
HOXA2O43364 RNU6-1270P-201ENST00000517128 108 ntBASIC4.12□□□□□ -1.75
HOXA2O43364 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXA2O43364 AP001318.4-201ENST00000616637 121 ntBASIC4.12□□□□□ -1.75
HOXA2O43364 MIR7154-201ENST00000620673 73 ntBASIC4.12□□□□□ -1.75
HOXA2O43364 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HOXA2O43364 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXA2O43364 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXA2O43364 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXA2O43364 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXA2O43364 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
HOXA2O43364 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HOXA2O43364 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HOXA2O43364 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXA2O43364 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXA2O43364 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms