Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PHGDHO43175 RNU6-1266P-201ENST00000362794 105 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 SNORD114-6-201ENST00000364393 72 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 Y_RNA.286-201ENST00000364813 102 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 Y_RNA.483-201ENST00000384380 101 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 RNU6-102P-201ENST00000384485 104 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 MIR29C-201ENST00000385231 88 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 RNU4-30P-201ENST00000410245 143 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 RNU2-52P-201ENST00000410680 190 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 RNA5SP270-201ENST00000411361 118 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 AL139109.1-201ENST00000455491 297 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.5□□□□□ -2.01
PHGDHO43175 SNORD109B-201ENST00000458961 67 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 SNORD109A-201ENST00000459128 67 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 RNU6-856P-201ENST00000516959 98 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.5□□□□□ -2.01
PHGDHO43175 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.5□□□□□ -2.01
PHGDHO43175 EIF4BP1-201ENST00000554881 351 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 AP000942.4-201ENST00000604811 241 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 AC022441.3-201ENST00000605737 136 ntBASIC2.5□□□□□ -2.01
PHGDHO43175 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PHGDHO43175 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PHGDHO43175 AC245060.5-201ENST00000610778 3293 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 RNU6-859P-201ENST00000362728 107 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 Y_RNA.331-201ENST00000365267 102 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 RNU1-52P-201ENST00000384190 164 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 Y_RNA.452-201ENST00000384202 108 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 MIR634-201ENST00000385208 97 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 MIR1302-3-201ENST00000408128 138 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 RPL23AP36-201ENST00000413895 458 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 AC008134.1-201ENST00000420943 193 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 CR769767.1-201ENST00000436337 346 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 AC096725.1-201ENST00000514266 313 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 RNU6-155P-201ENST00000516347 100 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 RNA5SP402-201ENST00000517148 110 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 SNORD113-5-201ENST00000607261 78 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.49□□□□□ -2.01
PHGDHO43175 AL590240.4-201ENST00000616908 390 ntBASIC2.49□□□□□ -2.01
PHGDHO43175 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PHGDHO43175 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PHGDHO43175 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PHGDHO43175 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PHGDHO43175 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.48□□□□□ -2.01
PHGDHO43175 AL159152.1-201ENST00000635019 2587 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 Y_RNA.84-201ENST00000363011 104 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 RNU6-1164P-201ENST00000364428 107 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 Y_RNA.446-201ENST00000384178 104 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 Y_RNA.461-201ENST00000384263 103 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 RNU2-54P-201ENST00000410299 190 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 RPS12P2-201ENST00000439728 269 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 AC025750.2-201ENST00000442609 450 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 AC005042.3-201ENST00000453230 174 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 AP001486.1-201ENST00000463339 476 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 SEPT14P8-201ENST00000508026 178 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 RNU2-12P-201ENST00000517216 168 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 AC025647.1-201ENST00000517879 253 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.48□□□□□ -2.01
PHGDHO43175 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.48□□□□□ -2.01
PHGDHO43175 AL033523.1-201ENST00000605153 153 ntBASIC2.48□□□□□ -2.01
PHGDHO43175 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.48□□□□□ -2.01
PHGDHO43175 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.48□□□□□ -2.01
PHGDHO43175 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PHGDHO43175 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PHGDHO43175 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PHGDHO43175 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.47□□□□□ -2.01
PHGDHO43175 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PHGDHO43175 Y_RNA.16-201ENST00000362421 102 ntBASIC2.47□□□□□ -2.01
PHGDHO43175 RNU6-23P-201ENST00000363283 107 ntBASIC2.47□□□□□ -2.01
PHGDHO43175 AC007064.1-201ENST00000412238 351 ntBASIC2.47□□□□□ -2.01
PHGDHO43175 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.47□□□□□ -2.01
PHGDHO43175 AC009963.1-201ENST00000417265 157 ntBASIC2.47□□□□□ -2.01
PHGDHO43175 AL109933.2-201ENST00000452651 260 ntBASIC2.47□□□□□ -2.01
PHGDHO43175 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.47□□□□□ -2.01
PHGDHO43175 RPL23AP3-201ENST00000453844 468 ntBASIC2.47□□□□□ -2.01
PHGDHO43175 RNU1-131P-201ENST00000458943 161 ntBASIC2.47□□□□□ -2.01
PHGDHO43175 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PHGDHO43175 AC107222.1-201ENST00000510899 637 ntBASIC2.47□□□□□ -2.01
PHGDHO43175 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.47□□□□□ -2.01
PHGDHO43175 GTF3AP2-201ENST00000557014 266 ntBASIC2.47□□□□□ -2.01
PHGDHO43175 MIR5194-201ENST00000582634 120 ntBASIC2.47□□□□□ -2.01
PHGDHO43175 U6.115-201ENST00000636045 103 ntBASIC2.47□□□□□ -2.01
PHGDHO43175 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PHGDHO43175 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PHGDHO43175 SNORA80A-201ENST00000363922 136 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 SNORA3A-201ENST00000364113 130 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 RNA5SP493-201ENST00000364115 91 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 RNU6-1240P-201ENST00000365155 104 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 Y_RNA.541-201ENST00000384640 113 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 MIR1302-6-201ENST00000408466 90 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 RNU6-1203P-201ENST00000410703 110 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 AC016909.1-201ENST00000415916 166 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.46□□□□□ -2.02
PHGDHO43175 AC060773.1-201ENST00000421698 310 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 AC096920.1-201ENST00000423991 241 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
PHGDHO43175 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.46□□□□□ -2.02
PHGDHO43175 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.46□□□□□ -2.02
PHGDHO43175 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.46□□□□□ -2.02
PHGDHO43175 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.46□□□□□ -2.02
PHGDHO43175 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms