Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC006435.5-201ENST00000624486 112 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 SNORD114-23-201ENST00000363536 72 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 RNU6-815P-201ENST00000384080 113 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 SNORA40.8-201ENST00000411034 126 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 AC084290.1-201ENST00000434995 374 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 HSFY5P-201ENST00000453726 309 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 ELOCP24-201ENST00000456370 334 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 SCARNA18-201ENST00000459004 134 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 RNA5SP227-201ENST00000516184 113 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 SNORA25.12-201ENST00000516202 82 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 RNU6-341P-201ENST00000516973 96 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 MRPS36P4-201ENST00000534436 298 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 AK6P2-201ENST00000549020 471 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 FGF7P1-201ENST00000582820 288 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 MIR4290-201ENST00000583807 95 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 SNORA4-201ENST00000584302 138 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 AC091178.2-201ENST00000584401 117 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 MIR4999-201ENST00000585029 91 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 AP000811.1-201ENST00000603803 651 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 AL078603.1-201ENST00000603824 313 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 AC112191.3-201ENST00000604371 277 ntBASIC-0.15□□□□□ -2.43
HMGB3O15347 RNU6-369P-201ENST00000362515 102 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 SNORA1B-201ENST00000362535 133 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 RNA5SP214-201ENST00000363378 118 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 MIR520F-201ENST00000384824 87 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.16□□□□□ -2.44
HMGB3O15347 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.16□□□□□ -2.44
HMGB3O15347 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.16□□□□□ -2.44
HMGB3O15347 AL392103.1-201ENST00000447000 198 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.16□□□□□ -2.44
HMGB3O15347 SNORD65B-201ENST00000459126 73 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 GMFBP1-201ENST00000467831 427 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 AF186996.7-201ENST00000492781 209 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 RNU6-237P-201ENST00000515985 71 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 Vault.3-201ENST00000516676 95 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 RNU2-46P-201ENST00000517038 113 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 AP002004.2-201ENST00000531656 154 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.16□□□□□ -2.44
HMGB3O15347 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.16□□□□□ -2.44
HMGB3O15347 HIF1AP1-201ENST00000553642 175 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 MIR4703-201ENST00000577728 79 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 AL133173.2-201ENST00000614270 90 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 AC027807.2-201ENST00000616099 408 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 RMST_2.1-201ENST00000617263 136 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 ZNF204P-201ENST00000416749 2397 ntBASIC-0.16□□□□□ -2.44
HMGB3O15347 RNA5SP517-201ENST00000364724 117 ntBASIC-0.17□□□□□ -2.44
HMGB3O15347 AC073261.1-201ENST00000429409 121 ntBASIC-0.17□□□□□ -2.44
HMGB3O15347 AL512286.1-201ENST00000439244 400 ntBASIC-0.17□□□□□ -2.44
HMGB3O15347 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.17□□□□□ -2.44
HMGB3O15347 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.17□□□□□ -2.44
HMGB3O15347 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.17□□□□□ -2.44
HMGB3O15347 AC104383.1-201ENST00000530297 370 ntBASIC-0.17□□□□□ -2.44
HMGB3O15347 RMST_3.1-201ENST00000611651 109 ntBASIC-0.17□□□□□ -2.44
HMGB3O15347 AC137590.2-201ENST00000619709 240 ntBASIC-0.17□□□□□ -2.44
HMGB3O15347 AL359757.2-201ENST00000624309 274 ntBASIC-0.17□□□□□ -2.44
HMGB3O15347 AC004808.1-201ENST00000627671 721 ntBASIC-0.17□□□□□ -2.44
HMGB3O15347 AC006927.3-201ENST00000638789 384 ntBASIC-0.17□□□□□ -2.44
HMGB3O15347 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 RNU6-245P-201ENST00000384020 107 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 MIR520C-201ENST00000385005 87 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 MTCO3P19-201ENST00000415864 321 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 GPR143P-201ENST00000434155 205 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.18□□□□□ -2.44
HMGB3O15347 Z98949.2-201ENST00000440996 144 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 USP9YP12-201ENST00000450481 570 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 RNU7-167P-201ENST00000459160 62 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.18□□□□□ -2.44
HMGB3O15347 AC097462.1-201ENST00000514125 324 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 SNORA74.3-201ENST00000517108 154 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
HMGB3O15347 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.18□□□□□ -2.44
HMGB3O15347 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-0.18□□□□□ -2.44
HMGB3O15347 MIR3612-201ENST00000579753 87 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 AC027279.3-201ENST00000625055 122 ntBASIC-0.18□□□□□ -2.44
HMGB3O15347 RNA5SP48-201ENST00000363969 126 ntBASIC-0.19□□□□□ -2.44
HMGB3O15347 RNU6-654P-201ENST00000364373 107 ntBASIC-0.19□□□□□ -2.44
HMGB3O15347 RNU1-139P-201ENST00000391307 165 ntBASIC-0.19□□□□□ -2.44
HMGB3O15347 MIR1302-7-201ENST00000408841 72 ntBASIC-0.19□□□□□ -2.44
HMGB3O15347 SNORD71-201ENST00000411292 86 ntBASIC-0.19□□□□□ -2.44
HMGB3O15347 RPS29P15-201ENST00000458329 171 ntBASIC-0.19□□□□□ -2.44
HMGB3O15347 AC091021.1-201ENST00000468051 388 ntBASIC-0.19□□□□□ -2.44
HMGB3O15347 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.19□□□□□ -2.44
HMGB3O15347 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.19□□□□□ -2.44
HMGB3O15347 AC005178.1-201ENST00000508392 440 ntBASIC-0.19□□□□□ -2.44
HMGB3O15347 RNA5SP220-201ENST00000516298 104 ntBASIC-0.19□□□□□ -2.44
HMGB3O15347 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.19□□□□□ -2.44
HMGB3O15347 AC023157.2-201ENST00000540596 141 ntBASIC-0.19□□□□□ -2.44
HMGB3O15347 RBM11P1-201ENST00000604951 799 ntBASIC-0.19□□□□□ -2.44
HMGB3O15347 AC010999.1-201ENST00000611856 324 ntBASIC-0.19□□□□□ -2.44
HMGB3O15347 AC007742.2-201ENST00000618226 398 ntBASIC-0.19□□□□□ -2.44
HMGB3O15347 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.2□□□□□ -2.44
HMGB3O15347 SNORD87-201ENST00000364849 89 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms