Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.05□□□□□ -1.92
SHOXO15266 RNA5SP208-201ENST00000516156 78 ntBASIC3.05□□□□□ -1.92
SHOXO15266 AC107934.2-201ENST00000518653 310 ntBASIC3.05□□□□□ -1.92
SHOXO15266 AL355297.2-201ENST00000604792 129 ntBASIC3.05□□□□□ -1.92
SHOXO15266 AC090115.4-201ENST00000609970 188 ntBASIC3.05□□□□□ -1.92
SHOXO15266 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.05□□□□□ -1.92
SHOXO15266 MIR6075-201ENST00000620782 95 ntBASIC3.05□□□□□ -1.92
SHOXO15266 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.05□□□□□ -1.92
SHOXO15266 AC068700.1-201ENST00000565862 3754 ntBASIC3.05□□□□□ -1.92
SHOXO15266 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
SHOXO15266 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.05□□□□□ -1.92
SHOXO15266 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHOXO15266 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.05□□□□□ -1.92
SHOXO15266 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHOXO15266 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHOXO15266 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.04□□□□□ -1.92
SHOXO15266 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHOXO15266 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.04□□□□□ -1.92
SHOXO15266 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.04□□□□□ -1.92
SHOXO15266 RNU1-13P-201ENST00000384499 162 ntBASIC3.04□□□□□ -1.92
SHOXO15266 RNU6-1117P-201ENST00000384525 104 ntBASIC3.04□□□□□ -1.92
SHOXO15266 MIR561-201ENST00000385216 97 ntBASIC3.04□□□□□ -1.92
SHOXO15266 RNA5SP424-201ENST00000390988 115 ntBASIC3.04□□□□□ -1.92
SHOXO15266 PTMAP2-201ENST00000397627 327 ntBASIC3.04□□□□□ -1.92
SHOXO15266 MIR513C-201ENST00000401352 84 ntBASIC3.04□□□□□ -1.92
SHOXO15266 MIR1253-201ENST00000408273 105 ntBASIC3.04□□□□□ -1.92
SHOXO15266 SNORA3.3-201ENST00000408712 125 ntBASIC3.04□□□□□ -1.92
SHOXO15266 DBIP2-201ENST00000419076 262 ntBASIC3.04□□□□□ -1.92
SHOXO15266 AC123900.1-201ENST00000420390 96 ntBASIC3.04□□□□□ -1.92
SHOXO15266 AL117339.2-201ENST00000430475 180 ntBASIC3.04□□□□□ -1.92
SHOXO15266 snoU13.22-201ENST00000459428 104 ntBASIC3.04□□□□□ -1.92
SHOXO15266 AC010531.2-201ENST00000465012 153 ntBASIC3.04□□□□□ -1.92
SHOXO15266 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.04□□□□□ -1.92
SHOXO15266 RN7SL601P-201ENST00000471221 293 ntBASIC3.04□□□□□ -1.92
SHOXO15266 RPS29P21-201ENST00000496272 170 ntBASIC3.04□□□□□ -1.92
SHOXO15266 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.04□□□□□ -1.92
SHOXO15266 SCARNA8-201ENST00000515924 131 ntBASIC3.04□□□□□ -1.92
SHOXO15266 RNU6-453P-201ENST00000516819 85 ntBASIC3.04□□□□□ -1.92
SHOXO15266 MIR2276-201ENST00000516886 89 ntBASIC3.04□□□□□ -1.92
SHOXO15266 MIR548X2-201ENST00000579776 100 ntBASIC3.04□□□□□ -1.92
SHOXO15266 AC090616.3-201ENST00000582184 217 ntBASIC3.04□□□□□ -1.92
SHOXO15266 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.04□□□□□ -1.92
SHOXO15266 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.04□□□□□ -1.92
SHOXO15266 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHOXO15266 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHOXO15266 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.04□□□□□ -1.92
SHOXO15266 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.03□□□□□ -1.92
SHOXO15266 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SHOXO15266 RNU6-199P-201ENST00000362954 107 ntBASIC3.03□□□□□ -1.92
SHOXO15266 RNU6-743P-201ENST00000364151 106 ntBASIC3.03□□□□□ -1.92
SHOXO15266 RNU6-643P-201ENST00000384018 107 ntBASIC3.03□□□□□ -1.92
SHOXO15266 RNU11-5P-201ENST00000391216 129 ntBASIC3.03□□□□□ -1.92
SHOXO15266 RNA5SP496-201ENST00000391240 109 ntBASIC3.03□□□□□ -1.92
SHOXO15266 SNORA79-201ENST00000408376 140 ntBASIC3.03□□□□□ -1.92
SHOXO15266 AC006461.1-201ENST00000412637 326 ntBASIC3.03□□□□□ -1.92
SHOXO15266 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.03□□□□□ -1.92
SHOXO15266 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.03□□□□□ -1.92
SHOXO15266 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.03□□□□□ -1.92
SHOXO15266 RN7SL499P-201ENST00000481141 276 ntBASIC3.03□□□□□ -1.92
SHOXO15266 RN7SL323P-201ENST00000494712 295 ntBASIC3.03□□□□□ -1.92
SHOXO15266 AC093259.1-201ENST00000509755 300 ntBASIC3.03□□□□□ -1.92
SHOXO15266 RNU6-1146P-201ENST00000516282 102 ntBASIC3.03□□□□□ -1.92
SHOXO15266 MIR4286-201ENST00000580651 93 ntBASIC3.03□□□□□ -1.92
SHOXO15266 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.03□□□□□ -1.92
SHOXO15266 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SHOXO15266 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SHOXO15266 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHOXO15266 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHOXO15266 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.02□□□□□ -1.93
SHOXO15266 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.02□□□□□ -1.93
SHOXO15266 RNU1-23P-201ENST00000363361 144 ntBASIC3.02□□□□□ -1.93
SHOXO15266 RNU6-674P-201ENST00000363831 107 ntBASIC3.02□□□□□ -1.93
SHOXO15266 Y_RNA.332-201ENST00000365271 113 ntBASIC3.02□□□□□ -1.93
SHOXO15266 RNU6-417P-201ENST00000384712 107 ntBASIC3.02□□□□□ -1.93
SHOXO15266 RNU6-383P-201ENST00000410864 94 ntBASIC3.02□□□□□ -1.93
SHOXO15266 AC016909.1-201ENST00000415916 166 ntBASIC3.02□□□□□ -1.93
SHOXO15266 RPL30P13-201ENST00000418873 348 ntBASIC3.02□□□□□ -1.93
SHOXO15266 EEF1B2P7-201ENST00000451177 676 ntBASIC3.02□□□□□ -1.93
SHOXO15266 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.02□□□□□ -1.93
SHOXO15266 CYCSP30-201ENST00000546447 172 ntBASIC3.02□□□□□ -1.93
SHOXO15266 MIR4438-201ENST00000585271 93 ntBASIC3.02□□□□□ -1.93
SHOXO15266 SNORA62.6-201ENST00000606322 83 ntBASIC3.02□□□□□ -1.93
SHOXO15266 AL449363.1-201ENST00000617815 186 ntBASIC3.02□□□□□ -1.93
SHOXO15266 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SHOXO15266 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SHOXO15266 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHOXO15266 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SHOXO15266 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SHOXO15266 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SHOXO15266 MIR372-201ENST00000362225 67 ntBASIC3.01□□□□□ -1.93
SHOXO15266 RNA5SP42-201ENST00000364278 115 ntBASIC3.01□□□□□ -1.93
SHOXO15266 RNA5SP283-201ENST00000365604 119 ntBASIC3.01□□□□□ -1.93
SHOXO15266 SNORA72-201ENST00000384339 132 ntBASIC3.01□□□□□ -1.93
SHOXO15266 MIR1289-1-201ENST00000408836 144 ntBASIC3.01□□□□□ -1.93
SHOXO15266 MTCO1P44-201ENST00000441935 243 ntBASIC3.01□□□□□ -1.93
SHOXO15266 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.01□□□□□ -1.93
SHOXO15266 RNU6-856P-201ENST00000516959 98 ntBASIC3.01□□□□□ -1.93
SHOXO15266 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.01□□□□□ -1.93
SHOXO15266 AC022149.2-201ENST00000621061 203 ntBASIC3.01□□□□□ -1.93
SHOXO15266 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms