Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.81□□□□□ -2.28
LSM1O15116 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.81□□□□□ -2.28
LSM1O15116 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.81□□□□□ -2.28
LSM1O15116 RNU6-956P-201ENST00000458868 103 ntBASIC0.81□□□□□ -2.28
LSM1O15116 RN7SKP298-201ENST00000515950 94 ntBASIC0.81□□□□□ -2.28
LSM1O15116 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
LSM1O15116 RNU6-917P-201ENST00000516294 104 ntBASIC0.81□□□□□ -2.28
LSM1O15116 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.81□□□□□ -2.28
LSM1O15116 CBX3P8-201ENST00000532412 525 ntBASIC0.81□□□□□ -2.28
LSM1O15116 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.81□□□□□ -2.28
LSM1O15116 BNIP3P10-201ENST00000605360 577 ntBASIC0.81□□□□□ -2.28
LSM1O15116 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.81□□□□□ -2.28
LSM1O15116 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.81□□□□□ -2.28
LSM1O15116 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.81□□□□□ -2.28
LSM1O15116 AC018630.2-201ENST00000534866 2403 ntBASIC0.8□□□□□ -2.28
LSM1O15116 AC008163.1-202ENST00000636004 2889 ntBASIC0.8□□□□□ -2.28
LSM1O15116 RNU6-199P-201ENST00000362954 107 ntBASIC0.8□□□□□ -2.28
LSM1O15116 RNU6-933P-201ENST00000384424 107 ntBASIC0.8□□□□□ -2.28
LSM1O15116 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.8□□□□□ -2.28
LSM1O15116 RNU6-1198P-201ENST00000516904 67 ntBASIC0.8□□□□□ -2.28
LSM1O15116 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.8□□□□□ -2.28
LSM1O15116 AL121579.1-201ENST00000555129 305 ntBASIC0.8□□□□□ -2.28
LSM1O15116 RNU6-254P-201ENST00000363377 107 ntBASIC0.79□□□□□ -2.28
LSM1O15116 RNU6-873P-201ENST00000363833 107 ntBASIC0.79□□□□□ -2.28
LSM1O15116 RNU6-128P-201ENST00000383976 107 ntBASIC0.79□□□□□ -2.28
LSM1O15116 RNU6-1080P-201ENST00000383982 107 ntBASIC0.79□□□□□ -2.28
LSM1O15116 Y_RNA.415-201ENST00000384012 112 ntBASIC0.79□□□□□ -2.28
LSM1O15116 RNU6-424P-201ENST00000384367 105 ntBASIC0.79□□□□□ -2.28
LSM1O15116 MIR200A-201ENST00000384875 90 ntBASIC0.79□□□□□ -2.28
LSM1O15116 RNU2-64P-201ENST00000411315 191 ntBASIC0.79□□□□□ -2.28
LSM1O15116 SNORA25.14-201ENST00000516481 132 ntBASIC0.79□□□□□ -2.28
LSM1O15116 RNU6-197P-201ENST00000516680 100 ntBASIC0.79□□□□□ -2.28
LSM1O15116 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.79□□□□□ -2.28
LSM1O15116 AC026371.1-201ENST00000551867 419 ntBASIC0.79□□□□□ -2.28
LSM1O15116 AC006435.5-201ENST00000624486 112 ntBASIC0.79□□□□□ -2.28
LSM1O15116 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.79□□□□□ -2.28
LSM1O15116 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
LSM1O15116 AP000568.1-201ENST00000282964 442 ntBASIC0.78□□□□□ -2.28
LSM1O15116 Y_RNA.231-201ENST00000364358 102 ntBASIC0.78□□□□□ -2.28
LSM1O15116 Y_RNA.319-201ENST00000365138 92 ntBASIC0.78□□□□□ -2.28
LSM1O15116 Y_RNA.553-201ENST00000384670 102 ntBASIC0.78□□□□□ -2.28
LSM1O15116 MIR32-201ENST00000384965 70 ntBASIC0.78□□□□□ -2.28
LSM1O15116 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
LSM1O15116 MTCO3P18-201ENST00000440206 761 ntBASIC0.78□□□□□ -2.28
LSM1O15116 MTCO1P19-201ENST00000443487 500 ntBASIC0.78□□□□□ -2.28
LSM1O15116 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.78□□□□□ -2.28
LSM1O15116 TPT1P7-201ENST00000458300 517 ntBASIC0.78□□□□□ -2.28
LSM1O15116 SNORD65B-201ENST00000459126 73 ntBASIC0.78□□□□□ -2.28
LSM1O15116 AC091179.3-201ENST00000474761 144 ntBASIC0.78□□□□□ -2.28
LSM1O15116 MTCO2P30-201ENST00000503662 364 ntBASIC0.78□□□□□ -2.28
LSM1O15116 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
LSM1O15116 RNU6-113P-201ENST00000516653 101 ntBASIC0.78□□□□□ -2.28
LSM1O15116 MIR4778-201ENST00000577635 80 ntBASIC0.78□□□□□ -2.28
LSM1O15116 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
LSM1O15116 RNU6-89P-201ENST00000606519 100 ntBASIC0.78□□□□□ -2.28
LSM1O15116 Z69908.1-201ENST00000622603 247 ntBASIC0.78□□□□□ -2.28
LSM1O15116 SNORA80D-201ENST00000384488 135 ntBASIC0.77□□□□□ -2.29
LSM1O15116 MIR608-201ENST00000384820 100 ntBASIC0.77□□□□□ -2.29
LSM1O15116 RNU11-5P-201ENST00000391216 129 ntBASIC0.77□□□□□ -2.29
LSM1O15116 AL590002.1-201ENST00000406554 418 ntBASIC0.77□□□□□ -2.29
LSM1O15116 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
LSM1O15116 MRPS10P1-201ENST00000448483 130 ntBASIC0.77□□□□□ -2.29
LSM1O15116 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.77□□□□□ -2.29
LSM1O15116 OR9P1P-201ENST00000496431 281 ntBASIC0.77□□□□□ -2.29
LSM1O15116 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.77□□□□□ -2.29
LSM1O15116 MIR3973-201ENST00000579824 107 ntBASIC0.77□□□□□ -2.29
LSM1O15116 PIGPP4-201ENST00000584447 307 ntBASIC0.77□□□□□ -2.29
LSM1O15116 MIR4438-201ENST00000585271 93 ntBASIC0.77□□□□□ -2.29
LSM1O15116 SNORA28-201ENST00000606769 126 ntBASIC0.77□□□□□ -2.29
LSM1O15116 RNA5SP432-201ENST00000362480 116 ntBASIC0.76□□□□□ -2.29
LSM1O15116 SNORA2.2-201ENST00000365473 135 ntBASIC0.76□□□□□ -2.29
LSM1O15116 RNU6-17P-201ENST00000384245 107 ntBASIC0.76□□□□□ -2.29
LSM1O15116 Y_RNA.481-201ENST00000384373 102 ntBASIC0.76□□□□□ -2.29
LSM1O15116 RNU6-18P-201ENST00000384527 107 ntBASIC0.76□□□□□ -2.29
LSM1O15116 MIR153-2-201ENST00000385225 87 ntBASIC0.76□□□□□ -2.29
LSM1O15116 RNU6-159P-201ENST00000391080 106 ntBASIC0.76□□□□□ -2.29
LSM1O15116 CALM2P4-201ENST00000430810 426 ntBASIC0.76□□□□□ -2.29
LSM1O15116 STAG3L5P-204ENST00000443759 179 ntBASIC0.76□□□□□ -2.29
LSM1O15116 MTND4P18-201ENST00000447010 465 ntBASIC0.76□□□□□ -2.29
LSM1O15116 MTND1P11-201ENST00000456661 876 ntBASIC0.76□□□□□ -2.29
LSM1O15116 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.76□□□□□ -2.29
LSM1O15116 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.76□□□□□ -2.29
LSM1O15116 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.76□□□□□ -2.29
LSM1O15116 PRELID3BP2-201ENST00000605362 201 ntBASIC0.76□□□□□ -2.29
LSM1O15116 AC106800.4-201ENST00000614905 153 ntBASIC0.76□□□□□ -2.29
LSM1O15116 AC006504.8-201ENST00000621046 635 ntBASIC0.76□□□□□ -2.29
LSM1O15116 Y_RNA.151-201ENST00000363566 112 ntBASIC0.75□□□□□ -2.29
LSM1O15116 Y_RNA.409-201ENST00000383990 98 ntBASIC0.75□□□□□ -2.29
LSM1O15116 U8.16-201ENST00000391279 133 ntBASIC0.75□□□□□ -2.29
LSM1O15116 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.75□□□□□ -2.29
LSM1O15116 AL353572.1-201ENST00000442490 417 ntBASIC0.75□□□□□ -2.29
LSM1O15116 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.75□□□□□ -2.29
LSM1O15116 RNU7-21P-201ENST00000459430 62 ntBASIC0.75□□□□□ -2.29
LSM1O15116 AC083904.1-201ENST00000487828 231 ntBASIC0.75□□□□□ -2.29
LSM1O15116 TRBVA-201ENST00000498804 316 ntBASIC0.75□□□□□ -2.29
LSM1O15116 AC093303.1-201ENST00000514549 295 ntBASIC0.75□□□□□ -2.29
LSM1O15116 AC136628.3-201ENST00000521868 290 ntBASIC0.75□□□□□ -2.29
LSM1O15116 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.75□□□□□ -2.29
LSM1O15116 AL158211.1-201ENST00000566763 763 ntBASIC0.75□□□□□ -2.29
LSM1O15116 AC119751.7-201ENST00000600494 245 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms