Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AL356379.1-201ENST00000414105 126 ntBASIC1.68□□□□□ -2.14
CDX4O14627 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
CDX4O14627 AC113618.1-201ENST00000416747 285 ntBASIC1.68□□□□□ -2.14
CDX4O14627 AC007098.1-201ENST00000420122 367 ntBASIC1.68□□□□□ -2.14
CDX4O14627 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.68□□□□□ -2.14
CDX4O14627 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.68□□□□□ -2.14
CDX4O14627 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.68□□□□□ -2.14
CDX4O14627 RPL23AP7-203ENST00000449021 469 ntBASIC1.68□□□□□ -2.14
CDX4O14627 OR2AQ1P-201ENST00000451972 200 ntBASIC1.68□□□□□ -2.14
CDX4O14627 snoU13.30-201ENST00000458951 104 ntBASIC1.68□□□□□ -2.14
CDX4O14627 SNORA25.10-201ENST00000515926 124 ntBASIC1.68□□□□□ -2.14
CDX4O14627 RNU6-965P-201ENST00000516721 96 ntBASIC1.68□□□□□ -2.14
CDX4O14627 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.68□□□□□ -2.14
CDX4O14627 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.68□□□□□ -2.14
CDX4O14627 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.68□□□□□ -2.14
CDX4O14627 7SK.7-201ENST00000603504 247 ntBASIC1.68□□□□□ -2.14
CDX4O14627 SNORD58B-201ENST00000607313 66 ntBASIC1.68□□□□□ -2.14
CDX4O14627 PCGEM1.1-201ENST00000613431 131 ntBASIC1.68□□□□□ -2.14
CDX4O14627 AC005520.5-201ENST00000613926 164 ntBASIC1.68□□□□□ -2.14
CDX4O14627 AL132822.1-201ENST00000617063 513 ntBASIC1.68□□□□□ -2.14
CDX4O14627 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.68□□□□□ -2.14
CDX4O14627 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.68□□□□□ -2.14
CDX4O14627 AC138305.3-201ENST00000624988 240 ntBASIC1.68□□□□□ -2.14
CDX4O14627 SCARNA4-201ENST00000629045 128 ntBASIC1.68□□□□□ -2.14
CDX4O14627 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
CDX4O14627 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
CDX4O14627 AL359851.1-201ENST00000569460 4997 ntBASIC1.67□□□□□ -2.14
CDX4O14627 Y_RNA.106-201ENST00000363189 100 ntBASIC1.67□□□□□ -2.14
CDX4O14627 RNU4-42P-201ENST00000364738 142 ntBASIC1.67□□□□□ -2.14
CDX4O14627 RNU1-115P-201ENST00000365329 160 ntBASIC1.67□□□□□ -2.14
CDX4O14627 Y_RNA.358-201ENST00000365491 99 ntBASIC1.67□□□□□ -2.14
CDX4O14627 RNU6-639P-201ENST00000384074 107 ntBASIC1.67□□□□□ -2.14
CDX4O14627 MIR625-201ENST00000385047 85 ntBASIC1.67□□□□□ -2.14
CDX4O14627 MIR549A-201ENST00000385268 96 ntBASIC1.67□□□□□ -2.14
CDX4O14627 MIR190B-201ENST00000401119 79 ntBASIC1.67□□□□□ -2.14
CDX4O14627 MTND2P23-201ENST00000422990 651 ntBASIC1.67□□□□□ -2.14
CDX4O14627 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.67□□□□□ -2.14
CDX4O14627 U8.22-201ENST00000459141 133 ntBASIC1.67□□□□□ -2.14
CDX4O14627 RNU7-87P-201ENST00000459343 62 ntBASIC1.67□□□□□ -2.14
CDX4O14627 AC090255.1-201ENST00000495779 349 ntBASIC1.67□□□□□ -2.14
CDX4O14627 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.67□□□□□ -2.14
CDX4O14627 RNU6-327P-201ENST00000516270 127 ntBASIC1.67□□□□□ -2.14
CDX4O14627 RNU1-40P-201ENST00000516816 164 ntBASIC1.67□□□□□ -2.14
CDX4O14627 RNU1-97P-201ENST00000516872 164 ntBASIC1.67□□□□□ -2.14
CDX4O14627 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.67□□□□□ -2.14
CDX4O14627 AC104581.2-201ENST00000572227 430 ntBASIC1.67□□□□□ -2.14
CDX4O14627 AC006504.6-201ENST00000590142 199 ntBASIC1.67□□□□□ -2.14
CDX4O14627 AC104695.3-201ENST00000604052 296 ntBASIC1.67□□□□□ -2.14
CDX4O14627 AL645939.4-201ENST00000604495 135 ntBASIC1.67□□□□□ -2.14
CDX4O14627 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.67□□□□□ -2.14
CDX4O14627 AL162373.1-201ENST00000620433 407 ntBASIC1.67□□□□□ -2.14
CDX4O14627 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.67□□□□□ -2.14
CDX4O14627 MIR4272-201ENST00000635924 64 ntBASIC1.67□□□□□ -2.14
CDX4O14627 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.67□□□□□ -2.14
CDX4O14627 RNU6-222P-201ENST00000362438 107 ntBASIC1.66□□□□□ -2.14
CDX4O14627 RNA5SP276-201ENST00000362580 94 ntBASIC1.66□□□□□ -2.14
CDX4O14627 Y_RNA.39-201ENST00000362620 98 ntBASIC1.66□□□□□ -2.14
CDX4O14627 RNU6-738P-201ENST00000384531 106 ntBASIC1.66□□□□□ -2.14
CDX4O14627 RNU6-1160P-201ENST00000384546 104 ntBASIC1.66□□□□□ -2.14
CDX4O14627 Y_RNA.527-201ENST00000384573 102 ntBASIC1.66□□□□□ -2.14
CDX4O14627 SNORA69.1-201ENST00000390904 137 ntBASIC1.66□□□□□ -2.14
CDX4O14627 Y_RNA.645-201ENST00000391229 102 ntBASIC1.66□□□□□ -2.14
CDX4O14627 HMGN2P39-201ENST00000398005 273 ntBASIC1.66□□□□□ -2.14
CDX4O14627 RPS26P42-201ENST00000413485 326 ntBASIC1.66□□□□□ -2.14
CDX4O14627 HMGN2P38-201ENST00000423806 265 ntBASIC1.66□□□□□ -2.14
CDX4O14627 AL445305.1-201ENST00000432577 575 ntBASIC1.66□□□□□ -2.14
CDX4O14627 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.66□□□□□ -2.14
CDX4O14627 Y_RNA.706-201ENST00000516933 99 ntBASIC1.66□□□□□ -2.14
CDX4O14627 RNU7-4P-201ENST00000516961 62 ntBASIC1.66□□□□□ -2.14
CDX4O14627 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CDX4O14627 CBX3P4-201ENST00000538909 354 ntBASIC1.66□□□□□ -2.14
CDX4O14627 HSBP1P1-201ENST00000555205 166 ntBASIC1.66□□□□□ -2.14
CDX4O14627 AC233702.2-202ENST00000562547 291 ntBASIC1.66□□□□□ -2.14
CDX4O14627 AC006600.1-201ENST00000572529 153 ntBASIC1.66□□□□□ -2.14
CDX4O14627 MIR4680-201ENST00000580906 66 ntBASIC1.66□□□□□ -2.14
CDX4O14627 AC100812.1-201ENST00000607622 580 ntBASIC1.66□□□□□ -2.14
CDX4O14627 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.66□□□□□ -2.14
CDX4O14627 SDR42E1P4-201ENST00000620894 481 ntBASIC1.66□□□□□ -2.14
CDX4O14627 AL606534.2-204ENST00000635008 178 ntBASIC1.66□□□□□ -2.14
CDX4O14627 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.66□□□□□ -2.14
CDX4O14627 AC005592.1-201ENST00000566527 1640 ntBASIC1.66□□□□□ -2.14
CDX4O14627 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.66□□□□□ -2.14
CDX4O14627 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
CDX4O14627 Y_RNA.158-201ENST00000363651 101 ntBASIC1.65□□□□□ -2.15
CDX4O14627 SNORA16.1-201ENST00000364597 132 ntBASIC1.65□□□□□ -2.15
CDX4O14627 RNU6-450P-201ENST00000364654 107 ntBASIC1.65□□□□□ -2.15
CDX4O14627 RNU6-234P-201ENST00000365229 104 ntBASIC1.65□□□□□ -2.15
CDX4O14627 Y_RNA.422-201ENST00000384054 114 ntBASIC1.65□□□□□ -2.15
CDX4O14627 RNU6-708P-201ENST00000384217 107 ntBASIC1.65□□□□□ -2.15
CDX4O14627 RNU6-17P-201ENST00000384245 107 ntBASIC1.65□□□□□ -2.15
CDX4O14627 SNORD14D-201ENST00000384390 87 ntBASIC1.65□□□□□ -2.15
CDX4O14627 RNU6-18P-201ENST00000384527 107 ntBASIC1.65□□□□□ -2.15
CDX4O14627 Y_RNA.592-201ENST00000410274 109 ntBASIC1.65□□□□□ -2.15
CDX4O14627 RNU2-48P-201ENST00000410694 191 ntBASIC1.65□□□□□ -2.15
CDX4O14627 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CDX4O14627 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.65□□□□□ -2.15
CDX4O14627 AC009474.2-201ENST00000451383 136 ntBASIC1.65□□□□□ -2.15
CDX4O14627 PRELID3BP1-201ENST00000457142 540 ntBASIC1.65□□□□□ -2.15
CDX4O14627 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.65□□□□□ -2.15
CDX4O14627 HMGN1P10-201ENST00000474557 553 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms