Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NDUFB9P3-201ENST00000521269 501 ntBASIC3.56□□□□□ -1.84
SOX1O00570 AC127455.1-201ENST00000565496 145 ntBASIC3.56□□□□□ -1.84
SOX1O00570 RPL30P11-203ENST00000598995 310 ntBASIC3.56□□□□□ -1.84
SOX1O00570 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.56□□□□□ -1.84
SOX1O00570 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SOX1O00570 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.56□□□□□ -1.84
SOX1O00570 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX1O00570 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX1O00570 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
SOX1O00570 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.55□□□□□ -1.84
SOX1O00570 SNORD45.3-201ENST00000363836 72 ntBASIC3.55□□□□□ -1.84
SOX1O00570 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.55□□□□□ -1.84
SOX1O00570 RNA5SP252-201ENST00000391131 119 ntBASIC3.55□□□□□ -1.84
SOX1O00570 MIR1183-201ENST00000408856 89 ntBASIC3.55□□□□□ -1.84
SOX1O00570 Y_RNA.622-201ENST00000411091 108 ntBASIC3.55□□□□□ -1.84
SOX1O00570 AC010154.1-201ENST00000425857 269 ntBASIC3.55□□□□□ -1.84
SOX1O00570 Z98742.2-201ENST00000431564 187 ntBASIC3.55□□□□□ -1.84
SOX1O00570 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.55□□□□□ -1.84
SOX1O00570 RNU7-14P-201ENST00000459331 62 ntBASIC3.55□□□□□ -1.84
SOX1O00570 RAC1P5-201ENST00000512182 576 ntBASIC3.55□□□□□ -1.84
SOX1O00570 RNA5SP367-201ENST00000516557 118 ntBASIC3.55□□□□□ -1.84
SOX1O00570 RNA5SP309-201ENST00000516670 106 ntBASIC3.55□□□□□ -1.84
SOX1O00570 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.55□□□□□ -1.84
SOX1O00570 MIR378D2-201ENST00000580636 98 ntBASIC3.55□□□□□ -1.84
SOX1O00570 MIR4753-201ENST00000585119 83 ntBASIC3.55□□□□□ -1.84
SOX1O00570 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SOX1O00570 IPO8P1-201ENST00000455509 3109 ntBASIC3.55□□□□□ -1.84
SOX1O00570 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SOX1O00570 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
SOX1O00570 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SOX1O00570 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.54□□□□□ -1.84
SOX1O00570 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SOX1O00570 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.54□□□□□ -1.84
SOX1O00570 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.54□□□□□ -1.84
SOX1O00570 SNORD116-13-201ENST00000384408 92 ntBASIC3.54□□□□□ -1.84
SOX1O00570 AL512604.1-201ENST00000404812 257 ntBASIC3.54□□□□□ -1.84
SOX1O00570 RNU6-1064P-201ENST00000410626 104 ntBASIC3.54□□□□□ -1.84
SOX1O00570 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.54□□□□□ -1.84
SOX1O00570 RPS29P31-201ENST00000446147 164 ntBASIC3.54□□□□□ -1.84
SOX1O00570 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX1O00570 SNORD65B-201ENST00000459126 73 ntBASIC3.54□□□□□ -1.84
SOX1O00570 RNU6-437P-201ENST00000459408 95 ntBASIC3.54□□□□□ -1.84
SOX1O00570 RPS26P55-201ENST00000471178 356 ntBASIC3.54□□□□□ -1.84
SOX1O00570 RPS26P15-201ENST00000488067 348 ntBASIC3.54□□□□□ -1.84
SOX1O00570 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX1O00570 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.54□□□□□ -1.84
SOX1O00570 AC090142.3-201ENST00000519012 385 ntBASIC3.54□□□□□ -1.84
SOX1O00570 MIR2682-201ENST00000580305 110 ntBASIC3.54□□□□□ -1.84
SOX1O00570 UBL5P2-201ENST00000583788 219 ntBASIC3.54□□□□□ -1.84
SOX1O00570 snoZ196.1-201ENST00000625269 89 ntBASIC3.54□□□□□ -1.84
SOX1O00570 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SOX1O00570 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.54□□□□□ -1.84
SOX1O00570 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SOX1O00570 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SOX1O00570 RNY1P11-201ENST00000363759 113 ntBASIC3.53□□□□□ -1.84
SOX1O00570 RNU6-674P-201ENST00000363831 107 ntBASIC3.53□□□□□ -1.84
SOX1O00570 RNU6-915P-201ENST00000364943 103 ntBASIC3.53□□□□□ -1.84
SOX1O00570 MIR1294-201ENST00000408503 142 ntBASIC3.53□□□□□ -1.84
SOX1O00570 RNU2-55P-201ENST00000411146 174 ntBASIC3.53□□□□□ -1.84
SOX1O00570 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.53□□□□□ -1.84
SOX1O00570 AC245047.4-201ENST00000433189 144 ntBASIC3.53□□□□□ -1.84
SOX1O00570 AC105272.1-201ENST00000438604 198 ntBASIC3.53□□□□□ -1.84
SOX1O00570 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.53□□□□□ -1.84
SOX1O00570 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.53□□□□□ -1.84
SOX1O00570 RNU7-107P-201ENST00000459121 61 ntBASIC3.53□□□□□ -1.84
SOX1O00570 RNU6-221P-201ENST00000459541 99 ntBASIC3.53□□□□□ -1.84
SOX1O00570 RPL23AP54-201ENST00000495129 419 ntBASIC3.53□□□□□ -1.84
SOX1O00570 AC093331.1-201ENST00000521474 169 ntBASIC3.53□□□□□ -1.84
SOX1O00570 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SOX1O00570 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.53□□□□□ -1.84
SOX1O00570 AL031274.2-201ENST00000599419 203 ntBASIC3.53□□□□□ -1.84
SOX1O00570 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SOX1O00570 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SOX1O00570 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SOX1O00570 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SOX1O00570 AP003122.5-201ENST00000527668 3766 ntBASIC3.52□□□□□ -1.85
SOX1O00570 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SOX1O00570 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SOX1O00570 RNU1-105P-201ENST00000363470 161 ntBASIC3.52□□□□□ -1.85
SOX1O00570 RNU6-1082P-201ENST00000364574 107 ntBASIC3.52□□□□□ -1.85
SOX1O00570 Y_RNA.584-201ENST00000391090 114 ntBASIC3.52□□□□□ -1.85
SOX1O00570 Y_RNA.587-201ENST00000391210 103 ntBASIC3.52□□□□□ -1.85
SOX1O00570 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.52□□□□□ -1.85
SOX1O00570 PDCD5P2-201ENST00000507570 312 ntBASIC3.52□□□□□ -1.85
SOX1O00570 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.52□□□□□ -1.85
SOX1O00570 SNORA31.1-201ENST00000515993 133 ntBASIC3.52□□□□□ -1.85
SOX1O00570 SNORA31.5-201ENST00000516190 133 ntBASIC3.52□□□□□ -1.85
SOX1O00570 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.52□□□□□ -1.85
SOX1O00570 Y_RNA.757-201ENST00000578934 114 ntBASIC3.52□□□□□ -1.85
SOX1O00570 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.52□□□□□ -1.85
SOX1O00570 MIR4727-201ENST00000622232 55 ntBASIC3.52□□□□□ -1.85
SOX1O00570 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SOX1O00570 AC018555.1-201ENST00000567548 1980 ntBASIC3.52□□□□□ -1.85
SOX1O00570 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SOX1O00570 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SOX1O00570 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SOX1O00570 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SOX1O00570 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SOX1O00570 RNU6-975P-201ENST00000384296 105 ntBASIC3.51□□□□□ -1.85
SOX1O00570 SNORD14D-201ENST00000384390 87 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms