Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNA5SP361-201ENST00000362686 118 ntBASIC1.84□□□□□ -2.11
O00370 SNORD115-8-201ENST00000363856 82 ntBASIC1.84□□□□□ -2.11
O00370 RNA5SP493-201ENST00000364115 91 ntBASIC1.84□□□□□ -2.11
O00370 SNORD115-38-201ENST00000365037 82 ntBASIC1.84□□□□□ -2.11
O00370 RNU6-245P-201ENST00000384020 107 ntBASIC1.84□□□□□ -2.11
O00370 RNU6-793P-201ENST00000384233 104 ntBASIC1.84□□□□□ -2.11
O00370 MIR300-201ENST00000401138 83 ntBASIC1.84□□□□□ -2.11
O00370 RNU6-1156P-201ENST00000410365 100 ntBASIC1.84□□□□□ -2.11
O00370 RNA5SP501-201ENST00000410990 112 ntBASIC1.84□□□□□ -2.11
O00370 RNU6-57P-201ENST00000411348 103 ntBASIC1.84□□□□□ -2.11
O00370 AC096644.2-201ENST00000429278 159 ntBASIC1.84□□□□□ -2.11
O00370 HSPE1P21-201ENST00000438283 308 ntBASIC1.84□□□□□ -2.11
O00370 AL603825.1-201ENST00000438481 80 ntBASIC1.84□□□□□ -2.11
O00370 AC114982.1-201ENST00000469402 321 ntBASIC1.84□□□□□ -2.11
O00370 HMGN2P9-201ENST00000476875 229 ntBASIC1.84□□□□□ -2.11
O00370 RNU6-250P-201ENST00000516958 103 ntBASIC1.84□□□□□ -2.11
O00370 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.84□□□□□ -2.11
O00370 AC090617.3-201ENST00000573670 475 ntBASIC1.84□□□□□ -2.11
O00370 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.11
O00370 MZT1P2-201ENST00000604387 248 ntBASIC1.84□□□□□ -2.11
O00370 AC010999.1-201ENST00000611856 324 ntBASIC1.84□□□□□ -2.11
O00370 AC006001.4-201ENST00000622243 395 ntBASIC1.84□□□□□ -2.11
O00370 AL359697.1-201ENST00000624879 587 ntBASIC1.84□□□□□ -2.11
O00370 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
O00370 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
O00370 MTND5P10-201ENST00000603719 1809 ntBASIC1.83□□□□□ -2.12
O00370 Y_RNA.146-201ENST00000363549 102 ntBASIC1.83□□□□□ -2.12
O00370 RNU6-1040P-201ENST00000383974 107 ntBASIC1.83□□□□□ -2.12
O00370 Y_RNA.557-201ENST00000384680 107 ntBASIC1.83□□□□□ -2.12
O00370 MIR628-201ENST00000385229 95 ntBASIC1.83□□□□□ -2.12
O00370 AC114482.1-201ENST00000418010 247 ntBASIC1.83□□□□□ -2.12
O00370 AC074290.1-201ENST00000448883 135 ntBASIC1.83□□□□□ -2.12
O00370 AC007395.1-201ENST00000451333 677 ntBASIC1.83□□□□□ -2.12
O00370 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.83□□□□□ -2.12
O00370 RNU6-699P-201ENST00000517081 110 ntBASIC1.83□□□□□ -2.12
O00370 MIR4255-201ENST00000579351 72 ntBASIC1.83□□□□□ -2.12
O00370 MIR3618-201ENST00000580330 88 ntBASIC1.83□□□□□ -2.12
O00370 AL133255.1-201ENST00000606374 441 ntBASIC1.83□□□□□ -2.12
O00370 AC073544.1-201ENST00000600110 1595 ntBASIC1.83□□□□□ -2.12
O00370 ZNF72P-201ENST00000425869 1908 ntBASIC1.83□□□□□ -2.12
O00370 AL159152.1-201ENST00000635019 2587 ntBASIC1.83□□□□□ -2.12
O00370 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
O00370 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
O00370 RNU4-79P-201ENST00000362764 141 ntBASIC1.82□□□□□ -2.12
O00370 Y_RNA.419-201ENST00000384041 102 ntBASIC1.82□□□□□ -2.12
O00370 SNORA69.1-201ENST00000390904 137 ntBASIC1.82□□□□□ -2.12
O00370 Y_RNA.579-201ENST00000390939 94 ntBASIC1.82□□□□□ -2.12
O00370 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.82□□□□□ -2.12
O00370 RPL31P63-201ENST00000422565 375 ntBASIC1.82□□□□□ -2.12
O00370 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.82□□□□□ -2.12
O00370 ELOCP24-201ENST00000456370 334 ntBASIC1.82□□□□□ -2.12
O00370 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.82□□□□□ -2.12
O00370 AC125232.2-201ENST00000592457 143 ntBASIC1.82□□□□□ -2.12
O00370 MIR8081-201ENST00000611533 95 ntBASIC1.82□□□□□ -2.12
O00370 MTND5P35-201ENST00000557537 1720 ntBASIC1.82□□□□□ -2.12
O00370 MTND4P29-201ENST00000503122 1372 ntBASIC1.82□□□□□ -2.12
O00370 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.81□□□□□ -2.12
O00370 RNU5F-3P-201ENST00000363767 117 ntBASIC1.81□□□□□ -2.12
O00370 Y_RNA.577-201ENST00000384794 101 ntBASIC1.81□□□□□ -2.12
O00370 MIR559-201ENST00000385188 96 ntBASIC1.81□□□□□ -2.12
O00370 RNA5SP213-201ENST00000391031 106 ntBASIC1.81□□□□□ -2.12
O00370 RNU1-139P-201ENST00000391307 165 ntBASIC1.81□□□□□ -2.12
O00370 AL627390.1-201ENST00000396055 340 ntBASIC1.81□□□□□ -2.12
O00370 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.81□□□□□ -2.12
O00370 UQCRBP2-201ENST00000447827 297 ntBASIC1.81□□□□□ -2.12
O00370 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.81□□□□□ -2.12
O00370 RNU7-57P-201ENST00000459540 60 ntBASIC1.81□□□□□ -2.12
O00370 RNU6-1041P-201ENST00000516254 102 ntBASIC1.81□□□□□ -2.12
O00370 Y_RNA.683-201ENST00000516508 93 ntBASIC1.81□□□□□ -2.12
O00370 RNU6-344P-201ENST00000516635 111 ntBASIC1.81□□□□□ -2.12
O00370 SUMO2P18-201ENST00000518873 252 ntBASIC1.81□□□□□ -2.12
O00370 AL117336.2-201ENST00000602435 335 ntBASIC1.81□□□□□ -2.12
O00370 LARP7P1-201ENST00000605576 316 ntBASIC1.81□□□□□ -2.12
O00370 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.81□□□□□ -2.12
O00370 AC068205.3-201ENST00000636385 468 ntBASIC1.81□□□□□ -2.12
O00370 MIR340-201ENST00000362125 95 ntBASIC1.8□□□□□ -2.12
O00370 RNU1-62P-201ENST00000362599 164 ntBASIC1.8□□□□□ -2.12
O00370 RNU6-137P-201ENST00000363680 108 ntBASIC1.8□□□□□ -2.12
O00370 RNU6-926P-201ENST00000384075 107 ntBASIC1.8□□□□□ -2.12
O00370 RNA5SP504-201ENST00000410676 117 ntBASIC1.8□□□□□ -2.12
O00370 RPS20P15-201ENST00000412792 311 ntBASIC1.8□□□□□ -2.12
O00370 UBE2V1P7-201ENST00000446395 340 ntBASIC1.8□□□□□ -2.12
O00370 RNU7-4P-201ENST00000516961 62 ntBASIC1.8□□□□□ -2.12
O00370 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.8□□□□□ -2.12
O00370 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.8□□□□□ -2.12
O00370 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.8□□□□□ -2.12
O00370 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.8□□□□□ -2.12
O00370 AC104985.2-201ENST00000620598 500 ntBASIC1.8□□□□□ -2.12
O00370 RNU6-490P-201ENST00000362985 107 ntBASIC1.79□□□□□ -2.12
O00370 RNU1-17P-201ENST00000363022 152 ntBASIC1.79□□□□□ -2.12
O00370 Y_RNA.187-201ENST00000363918 113 ntBASIC1.79□□□□□ -2.12
O00370 Y_RNA.813-201ENST00000364639 102 ntBASIC1.79□□□□□ -2.12
O00370 Y_RNA.428-201ENST00000384078 102 ntBASIC1.79□□□□□ -2.12
O00370 RNU6-281P-201ENST00000384212 103 ntBASIC1.79□□□□□ -2.12
O00370 MIR586-201ENST00000385035 97 ntBASIC1.79□□□□□ -2.12
O00370 Y_RNA.595-201ENST00000410403 105 ntBASIC1.79□□□□□ -2.12
O00370 EIF1P2-201ENST00000428233 350 ntBASIC1.79□□□□□ -2.12
O00370 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.79□□□□□ -2.12
O00370 HMGN2P34-201ENST00000437647 269 ntBASIC1.79□□□□□ -2.12
O00370 AC027575.1-201ENST00000481064 460 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms