Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC010975.3-201ENST00000618727 978 ntBASIC-0.78□□□□□ -2.53
COL6A5A8TX70 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.78□□□□□ -2.53
COL6A5A8TX70 SNORD115-33-201ENST00000363723 82 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 RNU6-98P-201ENST00000384173 107 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.79□□□□□ -2.54
COL6A5A8TX70 RNU6-994P-201ENST00000410507 111 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 RNU4-27P-201ENST00000410889 139 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.79□□□□□ -2.54
COL6A5A8TX70 RPL39P34-201ENST00000477141 156 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 AC107401.1-201ENST00000503426 685 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 AC093259.1-201ENST00000509755 300 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 RNU6-410P-201ENST00000517006 107 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.79□□□□□ -2.54
COL6A5A8TX70 CDR1-202ENST00000625883 1485 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 RNU6-862P-201ENST00000362804 105 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 RNU6-396P-201ENST00000365369 105 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 SNORD82-201ENST00000365530 70 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 RNU6-466P-201ENST00000391224 103 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 SNORA81-201ENST00000408493 178 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 RNU2-33P-201ENST00000410344 192 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 AC006600.1-201ENST00000572529 153 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 AC087683.2-201ENST00000611384 326 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 AC079416.3-201ENST00000624479 549 ntBASIC-0.79□□□□□ -2.54
COL6A5A8TX70 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 RNU6-331P-201ENST00000384724 107 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 RNU6-576P-201ENST00000390854 102 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 AC010154.1-201ENST00000425857 269 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 CALM2P4-201ENST00000430810 426 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-0.8□□□□□ -2.54
COL6A5A8TX70 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.8□□□□□ -2.54
COL6A5A8TX70 RNA5SP106-201ENST00000517274 100 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 MIR3136-201ENST00000583498 78 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 MIR6851-201ENST00000617060 67 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 AC099654.8-201ENST00000637757 681 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 RNU6-187P-201ENST00000384139 106 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 MIR501-201ENST00000390204 84 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 TXNL1P1-201ENST00000429528 554 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC-0.8□□□□□ -2.54
COL6A5A8TX70 AC113420.1-201ENST00000507903 571 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-0.8□□□□□ -2.54
COL6A5A8TX70 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.8□□□□□ -2.54
COL6A5A8TX70 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.8□□□□□ -2.54
COL6A5A8TX70 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.81□□□□□ -2.54
COL6A5A8TX70 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.81□□□□□ -2.54
COL6A5A8TX70 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.81□□□□□ -2.54
COL6A5A8TX70 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 RNU6-128P-201ENST00000383976 107 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 SNORD56B-201ENST00000384713 71 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 MIR518F-201ENST00000384973 87 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 RNU6-754P-201ENST00000391166 107 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 SNORD83.1-201ENST00000411362 77 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.81□□□□□ -2.54
COL6A5A8TX70 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.81□□□□□ -2.54
COL6A5A8TX70 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.81□□□□□ -2.54
COL6A5A8TX70 AC010153.1-201ENST00000432862 727 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 AL445193.1-201ENST00000441183 141 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 SNORA13-201ENST00000458790 133 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 AC022784.5-201ENST00000522241 437 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 AC133104.2-201ENST00000615272 193 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.81□□□□□ -2.54
COL6A5A8TX70 MIR6079-201ENST00000635807 62 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.81□□□□□ -2.54
COL6A5A8TX70 MIR1-1-201ENST00000362147 71 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 MIR148A-201ENST00000362215 68 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 RNU6-778P-201ENST00000363269 103 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 USMG5P1-201ENST00000425964 177 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.81□□□□□ -2.54
COL6A5A8TX70 AC093850.1-201ENST00000454121 251 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 HSPE1P23-201ENST00000509838 286 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.81□□□□□ -2.54
COL6A5A8TX70 SNORA18.7-201ENST00000516910 131 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.81□□□□□ -2.54
COL6A5A8TX70 AC080078.2-201ENST00000603766 501 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 AL391903.3-201ENST00000612158 163 ntBASIC-0.81□□□□□ -2.54
COL6A5A8TX70 SNORA72.1-201ENST00000363485 129 ntBASIC-0.82□□□□□ -2.54
COL6A5A8TX70 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.82□□□□□ -2.54
COL6A5A8TX70 U8.16-201ENST00000391279 133 ntBASIC-0.82□□□□□ -2.54
COL6A5A8TX70 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
COL6A5A8TX70 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.82□□□□□ -2.54
COL6A5A8TX70 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.82□□□□□ -2.54
COL6A5A8TX70 AL442067.1-201ENST00000613261 223 ntBASIC-0.82□□□□□ -2.54
COL6A5A8TX70 AC007014.2-201ENST00000615581 479 ntBASIC-0.82□□□□□ -2.54
COL6A5A8TX70 AC027644.1-201ENST00000419595 298 ntBASIC-0.82□□□□□ -2.54
COL6A5A8TX70 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.82□□□□□ -2.54
COL6A5A8TX70 USP9YP14-201ENST00000430663 563 ntBASIC-0.82□□□□□ -2.54
COL6A5A8TX70 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.82□□□□□ -2.54
COL6A5A8TX70 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.82□□□□□ -2.54
COL6A5A8TX70 AC023827.1-201ENST00000569247 97 ntBASIC-0.82□□□□□ -2.54
COL6A5A8TX70 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.82□□□□□ -2.54
COL6A5A8TX70 AL590396.2-201ENST00000636511 1041 ntBASIC-0.82□□□□□ -2.54
COL6A5A8TX70 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 RNY1P2-201ENST00000364820 117 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 MIR301A-201ENST00000385261 86 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms