Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 SNORD83B-201ENST00000386745 93 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 MT-TN-201ENST00000387400 73 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 RNU6-817P-201ENST00000391083 104 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 MTND3P17-201ENST00000416968 344 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 SPINT5P-201ENST00000448174 155 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 USP9YP25-201ENST00000457708 443 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 AC107297.1-201ENST00000459991 176 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 AC010468.3-201ENST00000508225 458 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 AC110760.3-201ENST00000598794 467 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 AC063944.3-201ENST00000609969 533 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 AC104073.3-201ENST00000610942 955 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 AC120349.2-201ENST00000625002 298 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 SNORD38B-202ENST00000625943 69 ntBASIC-1.01□□□□□ -2.57
RGPD3A6NKT7 CDR1-202ENST00000625883 1485 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 RNA5SP192-201ENST00000364404 120 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 Y_RNA.336-201ENST00000365307 109 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 SNORA67.2-201ENST00000384300 149 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 RNU2-42P-201ENST00000410697 113 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 RNU7-102P-201ENST00000458948 62 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 Y_RNA.689-201ENST00000516589 107 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 RNU6-63P-201ENST00000516690 95 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 AC010999.1-201ENST00000611856 324 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 AC091304.9-201ENST00000612091 226 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 AC104260.1-201ENST00000616660 539 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 AC132825.7-201ENST00000638744 335 ntBASIC-1.02□□□□□ -2.57
RGPD3A6NKT7 RNU6-1141P-201ENST00000364520 107 ntBASIC-1.03□□□□□ -2.57
RGPD3A6NKT7 AL512326.2-201ENST00000426359 151 ntBASIC-1.03□□□□□ -2.57
RGPD3A6NKT7 MTND1P14-201ENST00000427400 950 ntBASIC-1.03□□□□□ -2.57
RGPD3A6NKT7 AC244670.1-201ENST00000436879 112 ntBASIC-1.03□□□□□ -2.57
RGPD3A6NKT7 AP001189.2-201ENST00000527320 189 ntBASIC-1.03□□□□□ -2.57
RGPD3A6NKT7 DEFB108A-201ENST00000530110 222 ntBASIC-1.03□□□□□ -2.57
RGPD3A6NKT7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.03□□□□□ -2.57
RGPD3A6NKT7 MIRLET7C-201ENST00000362160 84 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 SNORD56.4-201ENST00000363883 71 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 Y_RNA.265-201ENST00000364677 108 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 SNORA75B-201ENST00000384053 137 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 RNU6-125P-201ENST00000384505 107 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 MIR587-201ENST00000384845 96 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 RNU6-796P-201ENST00000391086 107 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 MTND3P20-201ENST00000407663 186 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 RNA5SP95-201ENST00000410319 137 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 RPS3AP3-201ENST00000411933 242 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 MLLT10P1-201ENST00000418346 262 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 RPS29P27-201ENST00000463711 170 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 SNORA27.4-201ENST00000516650 95 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 AC008752.3-201ENST00000588113 712 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 AL596327.1-201ENST00000603629 213 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 AL442067.1-201ENST00000613261 223 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 MIR6738-201ENST00000619620 64 ntBASIC-1.03□□□□□ -2.58
RGPD3A6NKT7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-1.04□□□□□ -2.58
RGPD3A6NKT7 RNU6-1245P-201ENST00000411130 106 ntBASIC-1.04□□□□□ -2.58
RGPD3A6NKT7 AC078809.1-201ENST00000427601 140 ntBASIC-1.04□□□□□ -2.58
RGPD3A6NKT7 POLR2KP2-201ENST00000438155 177 ntBASIC-1.04□□□□□ -2.58
RGPD3A6NKT7 MTND2P20-201ENST00000440805 661 ntBASIC-1.04□□□□□ -2.58
RGPD3A6NKT7 AC112206.4-201ENST00000515142 405 ntBASIC-1.04□□□□□ -2.58
RGPD3A6NKT7 AC018448.1-201ENST00000552843 316 ntBASIC-1.04□□□□□ -2.58
RGPD3A6NKT7 AC112204.3-201ENST00000623822 332 ntBASIC-1.04□□□□□ -2.58
RGPD3A6NKT7 MIR655-201ENST00000362159 97 ntBASIC-1.05□□□□□ -2.58
RGPD3A6NKT7 RNU1-76P-201ENST00000362903 159 ntBASIC-1.05□□□□□ -2.58
RGPD3A6NKT7 RNU6-187P-201ENST00000384139 106 ntBASIC-1.05□□□□□ -2.58
RGPD3A6NKT7 SNORA3B-201ENST00000391305 131 ntBASIC-1.05□□□□□ -2.58
RGPD3A6NKT7 HSFY7P-201ENST00000432672 318 ntBASIC-1.05□□□□□ -2.58
RGPD3A6NKT7 HSFY8P-201ENST00000437934 318 ntBASIC-1.05□□□□□ -2.58
RGPD3A6NKT7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.05□□□□□ -2.58
RGPD3A6NKT7 RNU6-567P-201ENST00000516746 107 ntBASIC-1.05□□□□□ -2.58
RGPD3A6NKT7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.05□□□□□ -2.58
RGPD3A6NKT7 MIR4753-201ENST00000585119 83 ntBASIC-1.05□□□□□ -2.58
RGPD3A6NKT7 AC103706.2-201ENST00000638080 240 ntBASIC-1.05□□□□□ -2.58
RGPD3A6NKT7 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 RNU6-24P-201ENST00000384440 107 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 MIR19A-201ENST00000384878 82 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 MIR125B2-201ENST00000385128 89 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 MTCO1P20-201ENST00000425366 358 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 AC009237.7-201ENST00000447357 229 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 RN7SKP19-201ENST00000516016 252 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 AC005520.5-201ENST00000613926 164 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 RNU6-811P-201ENST00000384069 107 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 RNU7-43P-201ENST00000516554 64 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 RNU7-28P-201ENST00000516759 62 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 RNU6-897P-201ENST00000517135 105 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 AC133485.4-201ENST00000561835 220 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 AC091178.2-201ENST00000584401 117 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 AC018462.2-201ENST00000605375 395 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 AC124016.2-201ENST00000610058 665 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 MIR4320-201ENST00000636981 65 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms