Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC068790.6-201ENST00000602558 258 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 AL121757.2-201ENST00000611223 313 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 Y_RNA.169-201ENST00000363745 96 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 RNU1-93P-201ENST00000364704 169 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 SNORA2.2-201ENST00000365473 135 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 Y_RNA.378-201ENST00000365652 113 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 RNU6-38P-201ENST00000384085 107 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 RNU11-5P-201ENST00000391216 129 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 MIR942-201ENST00000401111 86 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 MTCO1P20-201ENST00000425366 358 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 MRPS10P2-201ENST00000431226 381 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 AL606489.2-201ENST00000433886 234 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 RNU7-21P-201ENST00000459430 62 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 RNA5SP255-201ENST00000516370 107 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 RNU6-1038P-201ENST00000516516 104 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 AK6P2-201ENST00000549020 471 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 AL133215.3-201ENST00000609801 448 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 AC006435.5-201ENST00000624486 112 ntBASIC0.57□□□□□ -2.32
RBFOX3A6NFN3 RNU6-137P-201ENST00000363680 108 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 MIR518E-201ENST00000385252 88 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 SNORD37.1-201ENST00000390968 65 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 RN7SKP142-201ENST00000411236 328 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 MTCO2P7-201ENST00000446518 666 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 AC079354.2-201ENST00000453523 154 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 RNU6-1208P-201ENST00000459588 107 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 AC022493.2-201ENST00000506122 481 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 AC091885.1-201ENST00000506658 268 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 AC091133.4-201ENST00000511142 308 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 SNORA70.12-201ENST00000516084 153 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 RNU6-58P-201ENST00000517143 103 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 AC016957.1-201ENST00000534895 309 ntBASIC0.56□□□□□ -2.32
RBFOX3A6NFN3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 SNORD50.1-201ENST00000362987 71 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 Y_RNA.116-201ENST00000363292 103 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 Y_RNA.167-201ENST00000363735 109 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 SNORD87-201ENST00000364849 89 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 RNU4-9P-201ENST00000364951 139 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 RNU6-17P-201ENST00000384245 107 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 RNU6-18P-201ENST00000384527 107 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 EIF4E2P1-201ENST00000393781 255 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 AL355796.1-201ENST00000406706 323 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 MRPS10P1-201ENST00000448483 130 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 TPT1P7-201ENST00000458300 517 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 MTND3P7-201ENST00000474435 343 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 RNU6-947P-201ENST00000516264 106 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 AC004817.2-201ENST00000561794 651 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 MIR151B-201ENST00000584249 96 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 MIR4438-201ENST00000585271 93 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 MTND4P12-201ENST00000498999 1377 ntBASIC0.55□□□□□ -2.32
RBFOX3A6NFN3 Y_RNA.1-201ENST00000352915 104 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 RNA5SP361-201ENST00000362686 118 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 RNU4-66P-201ENST00000365199 138 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 RNU4-20P-201ENST00000365601 151 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 CALM2P4-201ENST00000430810 426 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 RNU7-90P-201ENST00000459216 62 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 RNA5SP401-201ENST00000515920 127 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 SNORA25.14-201ENST00000516481 132 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 RNU7-28P-201ENST00000516759 62 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 MIR3973-201ENST00000579824 107 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 AC004832.4-201ENST00000608952 331 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 AC092807.2-201ENST00000609367 243 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 AC108706.1-201ENST00000611053 297 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 FAM157A-202ENST00000615155 405 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 AL158063.1-201ENST00000615349 536 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 MIR6079-201ENST00000635807 62 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 AC068137.4-201ENST00000638485 296 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 CASC19-280ENST00000642102 1351 ntBASIC0.54□□□□□ -2.32
RBFOX3A6NFN3 Y_RNA.100-201ENST00000363141 102 ntBASIC0.53□□□□□ -2.32
RBFOX3A6NFN3 SNORD113-7-201ENST00000363762 77 ntBASIC0.53□□□□□ -2.32
RBFOX3A6NFN3 Y_RNA.319-201ENST00000365138 92 ntBASIC0.53□□□□□ -2.32
RBFOX3A6NFN3 Y_RNA.381-201ENST00000365666 102 ntBASIC0.53□□□□□ -2.32
RBFOX3A6NFN3 SNORD116-13-201ENST00000384408 92 ntBASIC0.53□□□□□ -2.32
RBFOX3A6NFN3 RNU6-110P-201ENST00000384508 104 ntBASIC0.53□□□□□ -2.32
RBFOX3A6NFN3 MIR32-201ENST00000384965 70 ntBASIC0.53□□□□□ -2.32
RBFOX3A6NFN3 MIR605-201ENST00000385078 83 ntBASIC0.53□□□□□ -2.32
RBFOX3A6NFN3 SNORA75.2-201ENST00000391138 150 ntBASIC0.53□□□□□ -2.32
RBFOX3A6NFN3 SNORA75.3-201ENST00000391231 150 ntBASIC0.53□□□□□ -2.32
RBFOX3A6NFN3 U8.16-201ENST00000391279 133 ntBASIC0.53□□□□□ -2.32
RBFOX3A6NFN3 CALM2P3-201ENST00000400429 449 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms