Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RN7SL442P-201ENST00000473804 320 ntBASIC2.98□□□□□ -1.93
CCDC163A0A0D9SF12 MIR2276-201ENST00000516886 89 ntBASIC2.98□□□□□ -1.93
CCDC163A0A0D9SF12 MIR4425-201ENST00000580572 84 ntBASIC2.98□□□□□ -1.93
CCDC163A0A0D9SF12 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC163A0A0D9SF12 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 AC073325.2-201ENST00000339545 159 ntBASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 SNORD115-30-201ENST00000364117 82 ntBASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 RNU6-338P-201ENST00000383888 105 ntBASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 RNU6-662P-201ENST00000384253 104 ntBASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 Y_RNA.478-201ENST00000384358 107 ntBASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 AC087499.2-201ENST00000432861 149 ntBASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 AC108938.1-201ENST00000451204 136 ntBASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 RNU6-221P-201ENST00000459541 99 ntBASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 AC091959.1-201ENST00000495857 238 ntBASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 RNU6-111P-201ENST00000517179 105 ntBASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 U4atac.1-201ENST00000618345 95 ntBASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
CCDC163A0A0D9SF12 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CCDC163A0A0D9SF12 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CCDC163A0A0D9SF12 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 RNA5SP432-201ENST00000362480 116 ntBASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.243-201ENST00000364481 109 ntBASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.332-201ENST00000365271 113 ntBASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6-407P-201ENST00000365280 104 ntBASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 SNORA9.2-201ENST00000365361 133 ntBASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.518-201ENST00000384552 113 ntBASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6-1235P-201ENST00000384559 107 ntBASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.552-201ENST00000384665 112 ntBASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 AC007064.1-201ENST00000412238 351 ntBASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6-498P-201ENST00000459468 107 ntBASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.679-201ENST00000516416 91 ntBASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 U2.14-201ENST00000615943 113 ntBASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CCDC163A0A0D9SF12 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 AP006437.1-201ENST00000641440 3685 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.117-201ENST00000363294 101 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6-740P-201ENST00000364734 105 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 MIR9-1-201ENST00000385198 89 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 MIR1253-201ENST00000408273 105 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 RNA5SP344-201ENST00000411081 104 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 AC108059.2-201ENST00000434626 151 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 SNORD65B-201ENST00000459126 73 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 RNU1-104P-201ENST00000517280 175 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 AC025647.1-201ENST00000517879 253 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 MIR3126-201ENST00000577443 74 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 AC005828.6-201ENST00000606610 232 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 BX284668.6-201ENST00000606899 438 ntBASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CCDC163A0A0D9SF12 MAPK10-266ENST00000641066 6555 ntBASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 MIR30E-201ENST00000362104 92 ntBASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.136-201ENST00000363444 102 ntBASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6-1240P-201ENST00000365155 104 ntBASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 SNORA20B-201ENST00000384220 132 ntBASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.515-201ENST00000384535 112 ntBASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 AC008134.1-201ENST00000420943 193 ntBASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 AL121890.1-201ENST00000435457 205 ntBASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6-191P-201ENST00000516295 94 ntBASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 SNORA27.4-201ENST00000516650 95 ntBASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 AC022202.1-201ENST00000613515 211 ntBASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC163A0A0D9SF12 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.20-201ENST00000362479 113 ntBASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 RNA5SP393-201ENST00000363423 117 ntBASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 AP002088.1-201ENST00000382740 395 ntBASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 RNU1-52P-201ENST00000384190 164 ntBASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 Y_RNA.539-201ENST00000384635 107 ntBASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 MIR524-201ENST00000385242 87 ntBASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 RNU6-1248P-201ENST00000391096 64 ntBASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 AL355796.1-201ENST00000406706 323 ntBASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 SRIP3-201ENST00000413200 219 ntBASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 MTCO1P44-201ENST00000441935 243 ntBASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 NDUFA5P6-201ENST00000542110 379 ntBASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 MIR4643-201ENST00000577473 78 ntBASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 AC090115.4-201ENST00000609970 188 ntBASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC163A0A0D9SF12 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms