Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 U2.14-201ENST00000615943 113 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU1-91P-201ENST00000364746 163 ntBASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.416-201ENST00000384014 113 ntBASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC105272.1-201ENST00000438604 198 ntBASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 AL357134.1-201ENST00000445848 426 ntBASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC091959.1-201ENST00000495857 238 ntBASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU2-34P-201ENST00000516534 121 ntBASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU6-388P-201ENST00000517012 105 ntBASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU6-389P-201ENST00000517048 105 ntBASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC025647.1-201ENST00000517879 253 ntBASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC027419.1-201ENST00000522976 328 ntBASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 GTF3AP2-201ENST00000557014 266 ntBASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC022202.1-201ENST00000613515 211 ntBASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
IGHV4-28A0A0C4DH34 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.44-201ENST00000362676 108 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.277-201ENST00000364754 102 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 DYNLT3P1-201ENST00000378574 347 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 SNORA20B-201ENST00000384220 132 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 MIR512-1-201ENST00000384913 84 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 AL355796.1-201ENST00000406706 323 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 RN7SKP123-201ENST00000410732 291 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNA5SP344-201ENST00000411081 104 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNA5SP492-201ENST00000411330 114 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC016909.1-201ENST00000415916 166 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 SNORD65B-201ENST00000459126 73 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 CYCSP26-201ENST00000534107 320 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 ELOCP29-201ENST00000588193 334 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC005357.1-201ENST00000588399 301 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC005828.6-201ENST00000606610 232 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC078938.1-201ENST00000620993 318 ntBASIC2.04□□□□□ -2.08
IGHV4-28A0A0C4DH34 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 SNORD115-3-201ENST00000363100 82 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.99-201ENST00000363138 105 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.111-201ENST00000363248 100 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.124-201ENST00000363339 93 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.478-201ENST00000384358 107 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU1-148P-201ENST00000384472 162 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC008134.1-201ENST00000420943 193 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 AL121890.1-201ENST00000435457 205 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 AP004217.1-201ENST00000480579 346 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU6-191P-201ENST00000516295 94 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU6-856P-201ENST00000516959 98 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 MIR3684-201ENST00000579779 74 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 AL512605.2-201ENST00000592972 256 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC245060.5-201ENST00000610778 3293 ntBASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
IGHV4-28A0A0C4DH34 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
IGHV4-28A0A0C4DH34 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.03□□□□□ -2.09
IGHV4-28A0A0C4DH34 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
IGHV4-28A0A0C4DH34 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.20-201ENST00000362479 113 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU1-35P-201ENST00000362782 153 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 SNORD114-6-201ENST00000364393 72 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-1240P-201ENST00000365155 104 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-662P-201ENST00000384253 104 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.539-201ENST00000384635 107 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 SNORD88.1-201ENST00000408684 91 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 EDDM3CP-201ENST00000415977 425 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 AL139109.1-201ENST00000455491 297 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNA5SP385-201ENST00000515947 110 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNA5SP356-201ENST00000515972 94 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-111P-201ENST00000517179 105 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 MIR3126-201ENST00000577443 74 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 MIR4643-201ENST00000577473 78 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC009487.4-201ENST00000624969 3585 ntBASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
IGHV4-28A0A0C4DH34 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 AL159152.1-201ENST00000635019 2587 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.65-201ENST00000362846 100 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-740P-201ENST00000364734 105 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-407P-201ENST00000365280 104 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-1318P-201ENST00000365389 103 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.361-201ENST00000365515 120 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-160P-201ENST00000384591 107 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 MIR873-201ENST00000401120 77 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU2-61P-201ENST00000411069 191 ntBASIC2.01□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC060773.1-201ENST00000421698 310 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms