Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 RPL23AP50-201ENST00000434149 455 ntBASIC0.17□□□□□ -2.38
SCN10AQ9Y5Y9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.17□□□□□ -2.38
SCN10AQ9Y5Y9 RNU6-917P-201ENST00000516294 104 ntBASIC0.17□□□□□ -2.38
SCN10AQ9Y5Y9 DEFB131C-201ENST00000528817 165 ntBASIC0.17□□□□□ -2.38
SCN10AQ9Y5Y9 ZNF519P3-201ENST00000557158 1032 ntBASIC0.17□□□□□ -2.38
SCN10AQ9Y5Y9 AC069431.2-201ENST00000604149 1099 ntBASIC0.17□□□□□ -2.38
SCN10AQ9Y5Y9 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.16□□□□□ -2.38
SCN10AQ9Y5Y9 RNU6-348P-201ENST00000384386 107 ntBASIC0.16□□□□□ -2.38
SCN10AQ9Y5Y9 SNORD73A-201ENST00000386062 65 ntBASIC0.16□□□□□ -2.38
SCN10AQ9Y5Y9 MTATP6P16-201ENST00000434543 526 ntBASIC0.16□□□□□ -2.38
SCN10AQ9Y5Y9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.16□□□□□ -2.38
SCN10AQ9Y5Y9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.16□□□□□ -2.38
SCN10AQ9Y5Y9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.16□□□□□ -2.38
SCN10AQ9Y5Y9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
SCN10AQ9Y5Y9 SNORD115-8-201ENST00000363856 82 ntBASIC0.15□□□□□ -2.38
SCN10AQ9Y5Y9 SNORD115-38-201ENST00000365037 82 ntBASIC0.15□□□□□ -2.38
SCN10AQ9Y5Y9 RNU6-424P-201ENST00000384367 105 ntBASIC0.15□□□□□ -2.38
SCN10AQ9Y5Y9 MRPL42P3-201ENST00000401492 326 ntBASIC0.15□□□□□ -2.38
SCN10AQ9Y5Y9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.15□□□□□ -2.38
SCN10AQ9Y5Y9 AC104332.1-201ENST00000440471 797 ntBASIC0.15□□□□□ -2.38
SCN10AQ9Y5Y9 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.15□□□□□ -2.38
SCN10AQ9Y5Y9 SNORA14.1-201ENST00000516113 141 ntBASIC0.15□□□□□ -2.38
SCN10AQ9Y5Y9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.15□□□□□ -2.38
SCN10AQ9Y5Y9 MIR3941-201ENST00000582572 103 ntBASIC0.15□□□□□ -2.38
SCN10AQ9Y5Y9 AL133173.2-201ENST00000614270 90 ntBASIC0.15□□□□□ -2.38
SCN10AQ9Y5Y9 AC104010.1-201ENST00000616889 150 ntBASIC0.15□□□□□ -2.38
SCN10AQ9Y5Y9 AC019226.2-201ENST00000625973 424 ntBASIC0.15□□□□□ -2.38
SCN10AQ9Y5Y9 MIR103A1-201ENST00000362165 78 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-827P-201ENST00000365553 106 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-1286P-201ENST00000383871 107 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-1242P-201ENST00000391052 103 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 Y_RNA.598-201ENST00000410480 95 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 MTCO1P19-201ENST00000443487 500 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 AL392103.1-201ENST00000447000 198 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 snoU13.19-201ENST00000459148 104 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 RNA5SP134-201ENST00000516492 96 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 RNU4-5P-201ENST00000607255 135 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 AC137590.2-201ENST00000619709 240 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 AC139792.3-201ENST00000623525 224 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 SEPT14P19-203ENST00000633205 211 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.15□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-349P-201ENST00000362402 107 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-833P-201ENST00000363486 107 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 SNORA33-201ENST00000363664 130 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 Y_RNA.549-201ENST00000384657 102 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-1093P-201ENST00000391194 107 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 TIMM9P3-201ENST00000428659 274 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AC079781.2-201ENST00000446424 169 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AL031274.1-201ENST00000450334 232 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AC097462.1-201ENST00000514125 324 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 RNA5SP54-201ENST00000516951 92 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AL162730.1-201ENST00000605734 292 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AC092354.1-201ENST00000606057 376 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 SNORA28-201ENST00000606769 126 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AC009159.2-201ENST00000617603 606 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 MIR4315-1-201ENST00000636800 73 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AC099654.13-201ENST00000639774 207 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 MIR4315-2-201ENST00000640925 73 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AL390237.1-201ENST00000404226 1415 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-517P-201ENST00000384362 110 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 SNORA2B-201ENST00000384583 137 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 MIR562-201ENST00000384894 95 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-550P-201ENST00000391057 101 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-757P-201ENST00000410334 100 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 MTND1P20-201ENST00000430341 950 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 RNU7-138P-201ENST00000459479 64 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-1037P-201ENST00000459571 107 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AC022493.2-201ENST00000506122 481 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AC116562.3-201ENST00000506136 177 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 RNU7-12P-201ENST00000516030 62 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 SNORA31.10-201ENST00000516482 106 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-344P-201ENST00000516635 111 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AC068587.5-201ENST00000528506 175 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AC026470.2-201ENST00000561492 181 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AC011195.1-201ENST00000578177 177 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AL139418.1-201ENST00000613613 177 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 AC122133.1-201ENST00000613964 233 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 SNORA43.4-201ENST00000629559 138 ntBASIC0.14□□□□□ -2.39
SCN10AQ9Y5Y9 SNORD113.3-201ENST00000364630 78 ntBASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 Y_RNA.265-201ENST00000364677 108 ntBASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-45P-201ENST00000384471 107 ntBASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 MIR320B2-201ENST00000408479 138 ntBASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 MTCYBP10-201ENST00000424905 650 ntBASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 MTCO2P23-201ENST00000425216 680 ntBASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 MTCO2P3-201ENST00000442543 421 ntBASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 HMGN2P26-201ENST00000463169 339 ntBASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 AL049830.1-201ENST00000468034 425 ntBASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-758P-201ENST00000516292 89 ntBASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-1110P-201ENST00000516462 101 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms