Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 MIR6830-201ENST00000636015 70 ntBASIC3.99□□□□□ -1.77
GTF3C3Q9Y5Q9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
GTF3C3Q9Y5Q9 Y_RNA.188-201ENST00000363952 111 ntBASIC3.98□□□□□ -1.77
GTF3C3Q9Y5Q9 Y_RNA.489-201ENST00000384410 101 ntBASIC3.98□□□□□ -1.77
GTF3C3Q9Y5Q9 RNU6-417P-201ENST00000384712 107 ntBASIC3.98□□□□□ -1.77
GTF3C3Q9Y5Q9 RNU2-38P-201ENST00000410856 79 ntBASIC3.98□□□□□ -1.77
GTF3C3Q9Y5Q9 BX510359.4-201ENST00000423750 193 ntBASIC3.98□□□□□ -1.77
GTF3C3Q9Y5Q9 RPS26P55-201ENST00000471178 356 ntBASIC3.98□□□□□ -1.77
GTF3C3Q9Y5Q9 MIR4529-201ENST00000578110 78 ntBASIC3.98□□□□□ -1.77
GTF3C3Q9Y5Q9 MIR4438-201ENST00000585271 93 ntBASIC3.98□□□□□ -1.77
GTF3C3Q9Y5Q9 AC007229.1-201ENST00000590455 412 ntBASIC3.98□□□□□ -1.77
GTF3C3Q9Y5Q9 MIR6716-201ENST00000613413 80 ntBASIC3.98□□□□□ -1.77
GTF3C3Q9Y5Q9 U6.73-201ENST00000619194 103 ntBASIC3.98□□□□□ -1.77
GTF3C3Q9Y5Q9 MIR492-201ENST00000638676 116 ntBASIC3.98□□□□□ -1.77
GTF3C3Q9Y5Q9 SNORA62-201ENST00000365493 153 ntBASIC3.97□□□□□ -1.77
GTF3C3Q9Y5Q9 Y_RNA.418-201ENST00000384029 102 ntBASIC3.97□□□□□ -1.77
GTF3C3Q9Y5Q9 Y_RNA.562-201ENST00000384695 113 ntBASIC3.97□□□□□ -1.77
GTF3C3Q9Y5Q9 CST2P1-201ENST00000425770 87 ntBASIC3.97□□□□□ -1.77
GTF3C3Q9Y5Q9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.97□□□□□ -1.77
GTF3C3Q9Y5Q9 RPS29P21-201ENST00000496272 170 ntBASIC3.97□□□□□ -1.77
GTF3C3Q9Y5Q9 RNU6-1278P-201ENST00000516130 107 ntBASIC3.97□□□□□ -1.77
GTF3C3Q9Y5Q9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.97□□□□□ -1.77
GTF3C3Q9Y5Q9 PARP1P2-201ENST00000556806 195 ntBASIC3.97□□□□□ -1.77
GTF3C3Q9Y5Q9 MIR5194-201ENST00000582634 120 ntBASIC3.97□□□□□ -1.77
GTF3C3Q9Y5Q9 AC012433.1-201ENST00000588916 398 ntBASIC3.97□□□□□ -1.77
GTF3C3Q9Y5Q9 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.97□□□□□ -1.77
GTF3C3Q9Y5Q9 AC073325.2-201ENST00000339545 159 ntBASIC3.96□□□□□ -1.78
GTF3C3Q9Y5Q9 Y_RNA.44-201ENST00000362676 108 ntBASIC3.96□□□□□ -1.78
GTF3C3Q9Y5Q9 RNU4-80P-201ENST00000363200 141 ntBASIC3.96□□□□□ -1.78
GTF3C3Q9Y5Q9 MIR141-201ENST00000384975 95 ntBASIC3.96□□□□□ -1.78
GTF3C3Q9Y5Q9 RNU6-191P-201ENST00000516295 94 ntBASIC3.96□□□□□ -1.78
GTF3C3Q9Y5Q9 RNU1-142P-201ENST00000516682 145 ntBASIC3.96□□□□□ -1.78
GTF3C3Q9Y5Q9 RPL21P9-201ENST00000556149 474 ntBASIC3.96□□□□□ -1.78
GTF3C3Q9Y5Q9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.96□□□□□ -1.78
GTF3C3Q9Y5Q9 MIR3145-201ENST00000580727 82 ntBASIC3.96□□□□□ -1.78
GTF3C3Q9Y5Q9 AC006023.1-201ENST00000603944 259 ntBASIC3.96□□□□□ -1.78
GTF3C3Q9Y5Q9 AL359075.3-201ENST00000613288 217 ntBASIC3.96□□□□□ -1.78
GTF3C3Q9Y5Q9 AC245884.12-201ENST00000615364 59 ntBASIC3.96□□□□□ -1.78
GTF3C3Q9Y5Q9 MIR372-201ENST00000362225 67 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 RNU4-35P-201ENST00000362588 141 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 SNORA3A-201ENST00000364113 130 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 Y_RNA.287-201ENST00000364853 94 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 Y_RNA.456-201ENST00000384232 111 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 U8.11-201ENST00000384699 133 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 OOSP1P1-201ENST00000423265 274 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 RPS15AP28-201ENST00000435088 386 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 U8.18-201ENST00000459285 133 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 YWHAEP4-201ENST00000505390 198 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 AP005660.1-201ENST00000522972 293 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 AC024995.1-201ENST00000523014 93 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 AC009127.3-201ENST00000570531 403 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 AC010297.1-201ENST00000623948 149 ntBASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.95□□□□□ -1.78
GTF3C3Q9Y5Q9 Y_RNA.341-201ENST00000365341 102 ntBASIC3.94□□□□□ -1.78
GTF3C3Q9Y5Q9 RNU1-51P-201ENST00000365345 176 ntBASIC3.94□□□□□ -1.78
GTF3C3Q9Y5Q9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
GTF3C3Q9Y5Q9 RNA5SP323-201ENST00000391094 133 ntBASIC3.94□□□□□ -1.78
GTF3C3Q9Y5Q9 RNU6-855P-201ENST00000410395 104 ntBASIC3.94□□□□□ -1.78
GTF3C3Q9Y5Q9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.94□□□□□ -1.78
GTF3C3Q9Y5Q9 RPL12P50-201ENST00000603116 116 ntBASIC3.94□□□□□ -1.78
GTF3C3Q9Y5Q9 MIR378J-201ENST00000611988 109 ntBASIC3.94□□□□□ -1.78
GTF3C3Q9Y5Q9 U1.36-201ENST00000620684 176 ntBASIC3.94□□□□□ -1.78
GTF3C3Q9Y5Q9 ZNF271P-202ENST00000465539 1970 ntBASIC3.94□□□□□ -1.78
GTF3C3Q9Y5Q9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
GTF3C3Q9Y5Q9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
GTF3C3Q9Y5Q9 UBE2WP1-201ENST00000362030 340 ntBASIC3.93□□□□□ -1.78
GTF3C3Q9Y5Q9 SNORA70C-201ENST00000384538 135 ntBASIC3.93□□□□□ -1.78
GTF3C3Q9Y5Q9 SNORD67-201ENST00000390833 111 ntBASIC3.93□□□□□ -1.78
GTF3C3Q9Y5Q9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.93□□□□□ -1.78
GTF3C3Q9Y5Q9 AC091959.1-201ENST00000495857 238 ntBASIC3.93□□□□□ -1.78
GTF3C3Q9Y5Q9 RNU7-99P-201ENST00000516271 62 ntBASIC3.93□□□□□ -1.78
GTF3C3Q9Y5Q9 RNU7-172P-201ENST00000517125 64 ntBASIC3.93□□□□□ -1.78
GTF3C3Q9Y5Q9 BX284668.6-201ENST00000606899 438 ntBASIC3.93□□□□□ -1.78
GTF3C3Q9Y5Q9 AL162274.2-201ENST00000614406 332 ntBASIC3.93□□□□□ -1.78
GTF3C3Q9Y5Q9 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.93□□□□□ -1.78
GTF3C3Q9Y5Q9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
GTF3C3Q9Y5Q9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 RNU1-96P-201ENST00000364163 162 ntBASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 SNORA67.1-201ENST00000364749 141 ntBASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 SNORA20.1-201ENST00000364790 130 ntBASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 Y_RNA.368-201ENST00000365547 113 ntBASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 Y_RNA.416-201ENST00000384014 113 ntBASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 Y_RNA.476-201ENST00000384347 108 ntBASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 AL117339.2-201ENST00000430475 180 ntBASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 RNU6-1271P-201ENST00000517049 105 ntBASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 SNORA31.25-201ENST00000517242 134 ntBASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 AC136628.3-201ENST00000521868 290 ntBASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 U2.14-201ENST00000615943 113 ntBASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 AC012442.3-202ENST00000636742 206 ntBASIC3.92□□□□□ -1.78
GTF3C3Q9Y5Q9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
GTF3C3Q9Y5Q9 RNU6-862P-201ENST00000362804 105 ntBASIC3.91□□□□□ -1.78
GTF3C3Q9Y5Q9 Y_RNA.307-201ENST00000365022 117 ntBASIC3.91□□□□□ -1.78
GTF3C3Q9Y5Q9 Y_RNA.447-201ENST00000384184 113 ntBASIC3.91□□□□□ -1.78
GTF3C3Q9Y5Q9 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.91□□□□□ -1.78
GTF3C3Q9Y5Q9 HMGN2P3-201ENST00000433603 273 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms