Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 Y_RNA.401-201ENST00000383965 117 ntBASIC2.68□□□□□ -1.98
PCDHA3Q9Y5H8 MT-TW-201ENST00000387382 68 ntBASIC2.68□□□□□ -1.98
PCDHA3Q9Y5H8 RNU6-1203P-201ENST00000410703 110 ntBASIC2.68□□□□□ -1.98
PCDHA3Q9Y5H8 RPL23AP36-201ENST00000413895 458 ntBASIC2.68□□□□□ -1.98
PCDHA3Q9Y5H8 RPS12P2-201ENST00000439728 269 ntBASIC2.68□□□□□ -1.98
PCDHA3Q9Y5H8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.68□□□□□ -1.98
PCDHA3Q9Y5H8 AC074290.1-201ENST00000448883 135 ntBASIC2.68□□□□□ -1.98
PCDHA3Q9Y5H8 AC093259.1-201ENST00000509755 300 ntBASIC2.68□□□□□ -1.98
PCDHA3Q9Y5H8 RNU6-107P-201ENST00000516643 102 ntBASIC2.68□□□□□ -1.98
PCDHA3Q9Y5H8 RNA5SP490-201ENST00000517141 136 ntBASIC2.68□□□□□ -1.98
PCDHA3Q9Y5H8 AP002001.1-203ENST00000534002 267 ntBASIC2.68□□□□□ -1.98
PCDHA3Q9Y5H8 RPL12P50-201ENST00000603116 116 ntBASIC2.68□□□□□ -1.98
PCDHA3Q9Y5H8 AC009487.4-201ENST00000624969 3585 ntBASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 Y_RNA.288-201ENST00000364854 92 ntBASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 SNORA72.2-201ENST00000365028 127 ntBASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 RNU6-438P-201ENST00000365561 103 ntBASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 MIR215-201ENST00000384858 110 ntBASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 MIR1185-2-201ENST00000408687 86 ntBASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 AL137159.1-201ENST00000452808 512 ntBASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 TRBVB-201ENST00000477100 408 ntBASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 NDUFA5P6-201ENST00000542110 379 ntBASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 AL109918.3-201ENST00000603072 338 ntBASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PCDHA3Q9Y5H8 RNU4-90P-201ENST00000362773 141 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 Y_RNA.101-201ENST00000363154 102 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 Y_RNA.332-201ENST00000365271 113 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 RNU6-975P-201ENST00000384296 105 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 Y_RNA.483-201ENST00000384380 101 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 RNU2-54P-201ENST00000410299 190 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 AC009238.1-201ENST00000442165 424 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 AC009237.6-201ENST00000446969 424 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 HSPE1P25-201ENST00000455484 251 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 RNU7-110P-201ENST00000516891 62 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 RNU6-570P-201ENST00000517051 105 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 RNU6-667P-201ENST00000517186 102 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 PRELID2P1-201ENST00000552837 301 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 AL590240.4-201ENST00000616908 390 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 AC091932.3-201ENST00000624223 323 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 AC127459.3-201ENST00000624328 466 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 AC135776.4-201ENST00000624300 1904 ntBASIC2.66□□□□□ -1.98
PCDHA3Q9Y5H8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.65□□□□□ -1.98
PCDHA3Q9Y5H8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-454P-201ENST00000364292 107 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-21P-201ENST00000384710 107 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.602-201ENST00000410535 92 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 AC009963.1-201ENST00000417265 157 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 AC123900.1-201ENST00000420390 96 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 AC105272.1-201ENST00000438604 198 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 AC005042.3-201ENST00000453230 174 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 SNORD127-201ENST00000458892 86 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 SNORA59A-201ENST00000459326 152 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 RNU7-57P-201ENST00000459540 60 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-948P-201ENST00000516374 107 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 RNU2-34P-201ENST00000516534 121 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 RPPH1-2P-201ENST00000516688 293 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 RNU2-12P-201ENST00000517216 168 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 ELOCP29-201ENST00000588193 334 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 AC062037.2-201ENST00000610137 73 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
PCDHA3Q9Y5H8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 Z82195.2-201ENST00000612348 18351 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 MIR335-201ENST00000362173 94 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 RNA5SP456-201ENST00000364002 114 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.446-201ENST00000384178 104 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-102P-201ENST00000384485 104 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.541-201ENST00000384640 113 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 MT-TG-201ENST00000387429 68 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 RNU4-30P-201ENST00000410245 143 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 RNA5SP181-201ENST00000410246 98 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 Y_RNA.618-201ENST00000410949 107 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 RNU6-1199P-201ENST00000411249 104 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 SRIP3-201ENST00000413200 219 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 AC096725.1-201ENST00000514266 313 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 RN7SKP132-201ENST00000516001 208 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 MIR3684-201ENST00000579779 74 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 AL137847.3-201ENST00000611521 109 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 AP001282.2-201ENST00000616149 309 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 AC010615.1-201ENST00000594254 1764 ntBASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PCDHA3Q9Y5H8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 296.4 ms