Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 AC009487.2-201ENST00000420969 6821 ntBASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 RNU6-801P-201ENST00000364087 105 ntBASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 SNORA9.2-201ENST00000365361 133 ntBASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 RNY1P5-201ENST00000383890 115 ntBASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 Y_RNA.571-201ENST00000384753 98 ntBASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 MIR548B-201ENST00000385247 97 ntBASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 SUMO2P18-201ENST00000518873 252 ntBASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 MIR3144-201ENST00000579460 79 ntBASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 AC008739.2-201ENST00000597006 317 ntBASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 U6.115-201ENST00000636045 103 ntBASIC3.11□□□□□ -1.91
PCDHB4Q9Y5E5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 Y_RNA.8-201ENST00000362353 102 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 RNU6-1305P-201ENST00000364353 104 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 SNORA51.4-201ENST00000364993 124 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 RNU6-1083P-201ENST00000384022 107 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 MIR29B2-201ENST00000385055 81 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 RNU6-394P-201ENST00000410735 107 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 RNU5E-9P-201ENST00000411164 104 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 RN7SL499P-201ENST00000481141 276 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 RNA5SP112-201ENST00000515937 99 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 RNU7-200P-201ENST00000516105 62 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 RNU6-1098P-201ENST00000516772 96 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 AC100767.1-201ENST00000528178 123 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 AC107016.2-201ENST00000547968 190 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 MIR4325-201ENST00000583049 90 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 RPL17P51-201ENST00000605218 238 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 AL078604.3-201ENST00000615580 211 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 UCA1.1-201ENST00000620952 75 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHB4Q9Y5E5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 AP003122.5-201ENST00000527668 3766 ntBASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 RNU4-17P-201ENST00000365598 141 ntBASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 Y_RNA.398-201ENST00000383952 99 ntBASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 MIR491-201ENST00000384877 84 ntBASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 MIR586-201ENST00000385035 97 ntBASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 SNORA40.19-201ENST00000390846 128 ntBASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 SNORA26.5-201ENST00000391215 123 ntBASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 RNU6-1135P-201ENST00000411083 103 ntBASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 RNU6-346P-201ENST00000516288 111 ntBASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 RNU6-56P-201ENST00000516986 93 ntBASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 AC136628.3-201ENST00000521868 290 ntBASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHB4Q9Y5E5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.09□□□□□ -1.92
PCDHB4Q9Y5E5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 AC091564.4-201ENST00000533934 2194 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 AC108206.1-201ENST00000570186 4159 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 Y_RNA.7-201ENST00000362352 102 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 RNU6-486P-201ENST00000363116 107 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 Y_RNA.361-201ENST00000365515 120 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 Y_RNA.441-201ENST00000384123 112 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 SNORA48.5-201ENST00000391143 135 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 RNU2-2P-201ENST00000410396 191 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 HMGN2P9-201ENST00000476875 229 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 SRIP1-201ENST00000489235 288 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 AC083906.5-201ENST00000503722 328 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 RNU5F-4P-201ENST00000516581 114 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 AL161756.2-201ENST00000604597 246 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 RNU2-4P-201ENST00000606190 192 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 U2.15-201ENST00000611544 191 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 U2.16-201ENST00000613119 191 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 U2.12-201ENST00000613778 191 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 U2.9-201ENST00000615427 191 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 U2.11-201ENST00000616345 191 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 U2.2-201ENST00000616535 191 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 U2.3-201ENST00000617785 191 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 U2.19-201ENST00000618602 191 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 RNU2-1-201ENST00000618664 191 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 U2.6-201ENST00000619225 191 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 U2.5-201ENST00000619465 191 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 U2.10-201ENST00000620268 191 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 AC091953.5-201ENST00000622919 233 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 AC010329.5-201ENST00000623497 2174 ntBASIC3.08□□□□□ -1.92
PCDHB4Q9Y5E5 AC068700.1-201ENST00000565862 3754 ntBASIC3.07□□□□□ -1.92
PCDHB4Q9Y5E5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
PCDHB4Q9Y5E5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms