Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.93□□□□□ -2.56
AP4S1Q9Y587 MIR4432-201ENST00000581823 84 ntBASIC-0.93□□□□□ -2.56
AP4S1Q9Y587 MIR548AC-201ENST00000585049 88 ntBASIC-0.93□□□□□ -2.56
AP4S1Q9Y587 AC010999.1-201ENST00000611856 324 ntBASIC-0.93□□□□□ -2.56
AP4S1Q9Y587 RNU6-777P-201ENST00000364265 104 ntBASIC-0.94□□□□□ -2.56
AP4S1Q9Y587 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.94□□□□□ -2.56
AP4S1Q9Y587 RNU6-946P-201ENST00000383878 107 ntBASIC-0.94□□□□□ -2.56
AP4S1Q9Y587 USP9YP11-201ENST00000427537 717 ntBASIC-0.94□□□□□ -2.56
AP4S1Q9Y587 AL590623.1-201ENST00000427864 105 ntBASIC-0.94□□□□□ -2.56
AP4S1Q9Y587 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.94□□□□□ -2.56
AP4S1Q9Y587 SEPT14P24-201ENST00000447236 180 ntBASIC-0.94□□□□□ -2.56
AP4S1Q9Y587 MTCO3P27-201ENST00000514397 196 ntBASIC-0.94□□□□□ -2.56
AP4S1Q9Y587 AC025647.1-201ENST00000517879 253 ntBASIC-0.94□□□□□ -2.56
AP4S1Q9Y587 AL512347.1-201ENST00000566420 503 ntBASIC-0.94□□□□□ -2.56
AP4S1Q9Y587 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.94□□□□□ -2.56
AP4S1Q9Y587 SNORD32A-201ENST00000364805 84 ntBASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 RNU6-652P-201ENST00000365488 107 ntBASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 U6.112-201ENST00000384129 70 ntBASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 AL031779.1-201ENST00000415663 330 ntBASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 RPS24P1-201ENST00000438550 371 ntBASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 AC016632.1-201ENST00000503994 196 ntBASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 RNU7-99P-201ENST00000516271 62 ntBASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 SNORA18.7-201ENST00000516910 131 ntBASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 AC104260.1-201ENST00000616660 539 ntBASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 AL162726.3-218ENST00000636401 95 ntBASIC-0.95□□□□□ -2.56
AP4S1Q9Y587 ZNF204P-201ENST00000416749 2397 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 RNU6-552P-201ENST00000362869 119 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 RNU6-580P-201ENST00000365159 107 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 MIR208B-201ENST00000401172 77 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 RNU6-293P-201ENST00000411259 106 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 RNU7-94P-201ENST00000459576 63 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 RPS29P27-201ENST00000463711 170 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 RNY4P37-201ENST00000516225 96 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 SNORA74.3-201ENST00000517108 154 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 AC109479.2-201ENST00000517842 174 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 AC023050.3-201ENST00000541142 333 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 AC096720.1-201ENST00000604441 183 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 RNU1-29P-201ENST00000606574 126 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 U6.73-201ENST00000619194 103 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 AC106754.1-201ENST00000562632 1513 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.96□□□□□ -2.56
AP4S1Q9Y587 MIR101-1-201ENST00000362265 75 ntBASIC-0.97□□□□□ -2.56
AP4S1Q9Y587 RNU5B-1-201ENST00000363286 116 ntBASIC-0.97□□□□□ -2.56
AP4S1Q9Y587 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.97□□□□□ -2.56
AP4S1Q9Y587 SNORA36A-201ENST00000384221 132 ntBASIC-0.97□□□□□ -2.56
AP4S1Q9Y587 RNA5SP451-201ENST00000410588 110 ntBASIC-0.97□□□□□ -2.56
AP4S1Q9Y587 AC090960.1-201ENST00000421072 306 ntBASIC-0.97□□□□□ -2.56
AP4S1Q9Y587 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.97□□□□□ -2.56
AP4S1Q9Y587 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.97□□□□□ -2.56
AP4S1Q9Y587 AC026371.1-201ENST00000551867 419 ntBASIC-0.97□□□□□ -2.56
AP4S1Q9Y587 AC104072.1-201ENST00000568817 668 ntBASIC-0.97□□□□□ -2.56
AP4S1Q9Y587 MIR3152-201ENST00000579801 74 ntBASIC-0.97□□□□□ -2.56
AP4S1Q9Y587 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 SNORA72.1-201ENST00000363485 129 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 SNORD45.3-201ENST00000363836 72 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 AL355143.1-201ENST00000407101 841 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 AC098592.1-201ENST00000419352 333 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 AL133396.1-201ENST00000432048 687 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 AL360271.2-201ENST00000447710 161 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 RNU7-57P-201ENST00000459540 60 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 AC007215.1-201ENST00000464893 276 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 SNORA14.1-201ENST00000516113 141 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 RNU2-60P-201ENST00000517290 128 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 AC023442.1-201ENST00000531247 422 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 MIR4752-201ENST00000579672 72 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 AC006380.1-201ENST00000603598 186 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 AL450270.1-201ENST00000606160 391 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 AL139286.2-201ENST00000606838 396 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 AC008250.2-201ENST00000615261 205 ntBASIC-0.98□□□□□ -2.57
AP4S1Q9Y587 SNORA25.7-201ENST00000364375 127 ntBASIC-0.99□□□□□ -2.57
AP4S1Q9Y587 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.99□□□□□ -2.57
AP4S1Q9Y587 MIR501-201ENST00000390204 84 ntBASIC-0.99□□□□□ -2.57
AP4S1Q9Y587 MTCO1P5-201ENST00000433573 344 ntBASIC-0.99□□□□□ -2.57
AP4S1Q9Y587 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
AP4S1Q9Y587 AC010486.2-201ENST00000505572 483 ntBASIC-0.99□□□□□ -2.57
AP4S1Q9Y587 RNU6-504P-201ENST00000516568 104 ntBASIC-0.99□□□□□ -2.57
AP4S1Q9Y587 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.99□□□□□ -2.57
AP4S1Q9Y587 AC087894.1-201ENST00000538359 518 ntBASIC-0.99□□□□□ -2.57
AP4S1Q9Y587 uc_338.28-201ENST00000612082 187 ntBASIC-0.99□□□□□ -2.57
AP4S1Q9Y587 RN7SL660P-201ENST00000614852 299 ntBASIC-0.99□□□□□ -2.57
AP4S1Q9Y587 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1□□□□□ -2.57
AP4S1Q9Y587 U3.4-201ENST00000363352 213 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 RNU6-1126P-201ENST00000384002 107 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 MIR938-201ENST00000401216 83 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 MIR891A-201ENST00000401237 79 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 AC004866.1-201ENST00000411748 78 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-1□□□□□ -2.57
AP4S1Q9Y587 AC079395.1-201ENST00000510981 262 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 Y_RNA.673-201ENST00000516306 88 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms