Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 AL391516.1-201ENST00000554380 2449 ntBASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 SNORA27.1-201ENST00000362604 124 ntBASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 SNORA63.4-201ENST00000362763 126 ntBASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 RNU6-1082P-201ENST00000364574 107 ntBASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 RNU6-1323P-201ENST00000384025 107 ntBASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 AC010401.1-201ENST00000463867 348 ntBASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 RPL36AP21-201ENST00000490372 323 ntBASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 AC093663.1-201ENST00000497190 394 ntBASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 RAC1P5-201ENST00000512182 576 ntBASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 SNORA31.21-201ENST00000517180 77 ntBASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
AP4E1Q9UPM8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
AP4E1Q9UPM8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.85
AP4E1Q9UPM8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 RNU6-476P-201ENST00000384726 107 ntBASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 MIR23A-201ENST00000385245 73 ntBASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 RNY4P18-201ENST00000391107 89 ntBASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 RNU6-1064P-201ENST00000410626 104 ntBASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 Y_RNA.622-201ENST00000411091 108 ntBASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 RN7SKP101-201ENST00000411376 320 ntBASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 AL158823.1-201ENST00000418441 478 ntBASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 RN7SL293P-201ENST00000481765 281 ntBASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 RNU5F-4P-201ENST00000516581 114 ntBASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 CYCSP26-201ENST00000534107 320 ntBASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 MIR4276-201ENST00000584832 70 ntBASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 AC023043.3-201ENST00000593113 385 ntBASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 AL021707.8-201ENST00000609428 183 ntBASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.46□□□□□ -1.86
AP4E1Q9UPM8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 MIR449B-201ENST00000384995 97 ntBASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 MIR1283-1-201ENST00000408494 87 ntBASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 AL358232.1-201ENST00000448030 501 ntBASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 EEF1B2P7-201ENST00000451177 676 ntBASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 AC008155.2-201ENST00000464337 397 ntBASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 PDCD5P2-201ENST00000507570 312 ntBASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 AC090049.2-201ENST00000550377 109 ntBASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 AL031274.2-201ENST00000599419 203 ntBASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 MIR92B-201ENST00000607575 96 ntBASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 MIR6129-201ENST00000616087 109 ntBASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 AL049781.1-201ENST00000623195 3585 ntBASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
AP4E1Q9UPM8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 AC093908.1-201ENST00000623125 8092 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 RNU1-70P-201ENST00000362618 164 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 RNU1-33P-201ENST00000364249 162 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 MIR29B2-201ENST00000385055 81 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 AC093578.1-201ENST00000415219 368 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 AL135786.1-201ENST00000415892 214 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 CYCSP49-201ENST00000420810 319 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 CYCSP35-201ENST00000451978 304 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 SNRPGP8-201ENST00000454064 226 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 AC006539.3-201ENST00000454258 129 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 HMGN1P18-201ENST00000457642 277 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 RNU6-437P-201ENST00000459408 95 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 RNA5SP76-201ENST00000516277 87 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 MIR4474-201ENST00000579189 78 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 POLR3GP1-201ENST00000594073 261 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 AL670379.2-201ENST00000604983 252 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 MIR8058-201ENST00000615737 89 ntBASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
AP4E1Q9UPM8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 RNU6-271P-201ENST00000363858 105 ntBASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 AL512604.1-201ENST00000404812 257 ntBASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 RNU7-57P-201ENST00000459540 60 ntBASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 RPL21P10-201ENST00000463521 490 ntBASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 RNU7-116P-201ENST00000516940 62 ntBASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 AC093331.1-201ENST00000521474 169 ntBASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 MIR378D2-201ENST00000580636 98 ntBASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 uc_338.1-201ENST00000612113 180 ntBASIC3.43□□□□□ -1.86
AP4E1Q9UPM8 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms