Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 RNA5SP387-201ENST00000364226 106 ntBASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 PCNPP3-201ENST00000393579 471 ntBASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 MTCO2P33-201ENST00000402100 465 ntBASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 AC104332.1-201ENST00000440471 797 ntBASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 UBBP3-201ENST00000445497 241 ntBASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 AP001486.1-201ENST00000463339 476 ntBASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 HMGB3P3-201ENST00000510526 400 ntBASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 AC100767.1-201ENST00000528178 123 ntBASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 NDUFA5P6-201ENST00000542110 379 ntBASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 MIR1254-2-201ENST00000579553 63 ntBASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 AC019176.2-201ENST00000611579 315 ntBASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 Y_RNA.172-201ENST00000363765 102 ntBASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 RNU6-1062P-201ENST00000383908 107 ntBASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 MIR449B-201ENST00000384995 97 ntBASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 SNORA48.7-201ENST00000391302 135 ntBASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 RNU7-141P-201ENST00000459304 62 ntBASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 AC022559.1-201ENST00000520905 205 ntBASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 MIR4444-1-201ENST00000581696 74 ntBASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 MIR4444-2-201ENST00000584390 74 ntBASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 U4.6-201ENST00000621618 127 ntBASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VTI1BQ9UEU0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 Y_RNA.233-201ENST00000364407 101 ntBASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 RNU4-17P-201ENST00000365598 141 ntBASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 MIR218-2-201ENST00000385006 110 ntBASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 AC010154.1-201ENST00000425857 269 ntBASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 SNORA70.18-201ENST00000516696 98 ntBASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 RNU6-861P-201ENST00000516745 106 ntBASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 AC087441.2-201ENST00000529141 262 ntBASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 CENPCP1-201ENST00000533085 2578 ntBASIC3.31□□□□□ -1.88
VTI1BQ9UEU0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 Y_RNA.99-201ENST00000363138 105 ntBASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 SNORD116-13-201ENST00000384408 92 ntBASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 SNORA11-201ENST00000408789 128 ntBASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 RN7SKP111-201ENST00000410349 271 ntBASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 RPS29P4-201ENST00000414733 161 ntBASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 RPS27P22-201ENST00000478056 241 ntBASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 AC010409.1-201ENST00000487382 476 ntBASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 RPL36AP21-201ENST00000490372 323 ntBASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 RN7SKP282-201ENST00000516824 299 ntBASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 RNU6-56P-201ENST00000516986 93 ntBASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 AC004832.4-201ENST00000608952 331 ntBASIC3.3□□□□□ -1.88
VTI1BQ9UEU0 AL356292.1-201ENST00000283110 373 ntBASIC3.29□□□□□ -1.88
VTI1BQ9UEU0 MIR518C-201ENST00000384822 101 ntBASIC3.29□□□□□ -1.88
VTI1BQ9UEU0 AL603908.1-201ENST00000406098 201 ntBASIC3.29□□□□□ -1.88
VTI1BQ9UEU0 HSPE1P21-201ENST00000438283 308 ntBASIC3.29□□□□□ -1.88
VTI1BQ9UEU0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.29□□□□□ -1.88
VTI1BQ9UEU0 AC109925.1-201ENST00000478069 331 ntBASIC3.29□□□□□ -1.88
VTI1BQ9UEU0 RNA5SP217-201ENST00000515959 91 ntBASIC3.29□□□□□ -1.88
VTI1BQ9UEU0 MIR4429-201ENST00000580105 73 ntBASIC3.29□□□□□ -1.88
VTI1BQ9UEU0 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.29□□□□□ -1.88
VTI1BQ9UEU0 AC068647.2-201ENST00000637380 353 ntBASIC3.29□□□□□ -1.88
VTI1BQ9UEU0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VTI1BQ9UEU0 AC068700.1-201ENST00000565862 3754 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 MIR148B-201ENST00000362252 99 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 RNA5SP119-201ENST00000362715 117 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 AL031121.1-201ENST00000406553 254 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 RPL32P35-201ENST00000415214 394 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 CST9LP2-201ENST00000437612 320 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 SUMO2P18-201ENST00000518873 252 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 AC245166.1-201ENST00000521012 253 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 MIR3922-201ENST00000585192 84 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 AC008739.3-201ENST00000603262 127 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 U3.45-201ENST00000607547 219 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 U2.15-201ENST00000611544 191 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 U2.16-201ENST00000613119 191 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 U2.12-201ENST00000613778 191 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 U2.20-201ENST00000613956 192 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 U2.9-201ENST00000615427 191 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 U2.11-201ENST00000616345 191 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 U2.2-201ENST00000616535 191 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 MIR548AY-201ENST00000617669 107 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 U2.3-201ENST00000617785 191 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 U2.19-201ENST00000618602 191 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 RNU2-1-201ENST00000618664 191 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 U2.6-201ENST00000619225 191 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 U2.5-201ENST00000619465 191 ntBASIC3.28□□□□□ -1.88
VTI1BQ9UEU0 U2.10-201ENST00000620268 191 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms