Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL158211.1-201ENST00000566763 763 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.57□□□□□ -2.32
CCDC88CQ9P219 SNORA59B-202ENST00000578183 701 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 MIR4424-201ENST00000585257 86 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AL603755.1-201ENST00000619504 163 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.57□□□□□ -2.32
CCDC88CQ9P219 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CCDC88CQ9P219 BX322639.1-202ENST00000423987 2213 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 RNU6-227P-201ENST00000362865 103 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 RNU6-784P-201ENST00000384330 106 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 RNU6-296P-201ENST00000384608 107 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 RNU6-1105P-201ENST00000384774 107 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AL606490.4-201ENST00000423117 127 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 RNU7-66P-201ENST00000459469 62 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AL163973.1-201ENST00000484753 577 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 HMGB1P29-201ENST00000505659 499 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 RNU6-1038P-201ENST00000516516 104 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.695-201ENST00000516715 107 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.57□□□□□ -2.32
CCDC88CQ9P219 UBL5P4-201ENST00000562584 236 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 MIR5696-201ENST00000578474 85 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 CPDP1-201ENST00000579660 283 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.57□□□□□ -2.32
CCDC88CQ9P219 SNRPGP20-201ENST00000604477 205 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AC009229.3-201ENST00000608056 282 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AC004223.4-201ENST00000612426 332 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 Z99129.1-201ENST00000612510 255 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 MIR8054-201ENST00000620877 86 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.57□□□□□ -2.32
CCDC88CQ9P219 AC068205.3-201ENST00000636385 468 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 MIR3974-201ENST00000637126 96 ntBASIC0.57□□□□□ -2.32
CCDC88CQ9P219 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
CCDC88CQ9P219 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.56□□□□□ -2.32
CCDC88CQ9P219 RNY3P3-201ENST00000363816 102 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 SNORA32.2-201ENST00000384049 122 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 RNU6-439P-201ENST00000384188 106 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 RNU6-910P-201ENST00000390844 107 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC88CQ9P219 TIMM9P3-201ENST00000428659 274 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 MTCO1P19-201ENST00000443487 500 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.56□□□□□ -2.32
CCDC88CQ9P219 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.56□□□□□ -2.32
CCDC88CQ9P219 RNU6-1132P-201ENST00000459214 107 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC88CQ9P219 HMGN1P12-201ENST00000499125 195 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 AC091133.4-201ENST00000511142 308 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 AC091874.1-201ENST00000511402 339 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC88CQ9P219 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CCDC88CQ9P219 RNA5SP503-201ENST00000517047 117 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
CCDC88CQ9P219 AL137161.1-201ENST00000532231 390 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 AC068790.2-201ENST00000602601 557 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 GHRLOS.1-201ENST00000610995 70 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 AC139792.3-201ENST00000623525 224 ntBASIC0.56□□□□□ -2.32
CCDC88CQ9P219 RNU6-1123P-201ENST00000362347 106 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.55□□□□□ -2.32
CCDC88CQ9P219 RNU6-348P-201ENST00000384386 107 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 MIR208B-201ENST00000401172 77 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 MRPL35P1-201ENST00000404272 572 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AL356776.1-201ENST00000406574 447 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 CETN4P-201ENST00000432407 469 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AC245047.7-201ENST00000440265 293 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AC073910.1-201ENST00000445047 438 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AC016717.1-201ENST00000448918 286 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 RNU7-34P-201ENST00000459394 64 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 RNU6-1198P-201ENST00000516904 67 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 RNA5SP54-201ENST00000516951 92 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AL118558.2-201ENST00000556294 238 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 SUB1P2-201ENST00000556401 297 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.55□□□□□ -2.32
CCDC88CQ9P219 RN7SKP299-201ENST00000606679 301 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AC004492.1-201ENST00000607036 742 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AL021879.1-201ENST00000611756 288 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CCDC88CQ9P219 MIR330-201ENST00000362196 94 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 RNU6-1303P-201ENST00000364841 107 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 RNU6-996P-201ENST00000365438 107 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.359-201ENST00000365498 102 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 RNU6-975P-201ENST00000384296 105 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 RNU6-1065P-201ENST00000384513 106 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 MIR216A-201ENST00000385063 110 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 RNU6-325P-201ENST00000411132 105 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AL353193.1-201ENST00000421444 268 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AL365203.2-201ENST00000423444 196 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AC010154.1-201ENST00000425857 269 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AC010975.2-201ENST00000427781 588 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AL358934.1-201ENST00000432346 324 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AC010493.1-201ENST00000513479 292 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 RNU6-1332P-201ENST00000516666 104 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 MIR1273G-201ENST00000577677 100 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AL162413.1-201ENST00000603198 110 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AL590095.2-201ENST00000604136 117 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AC092807.2-201ENST00000609367 243 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 AC009248.2-201ENST00000619826 254 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 ZNF204P-201ENST00000416749 2397 ntBASIC0.55□□□□□ -2.32
CCDC88CQ9P219 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.55□□□□□ -2.32
CCDC88CQ9P219 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms