Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 Y_RNA.65-201ENST00000362846 100 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 RNU4-80P-201ENST00000363200 141 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 RNU6-525P-201ENST00000363685 104 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 Y_RNA.329-201ENST00000365209 107 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 Y_RNA.352-201ENST00000365439 102 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 RNU6-326P-201ENST00000365480 107 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 SNORA25B-201ENST00000365507 128 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 Y_RNA.418-201ENST00000384029 102 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 RNU6-975P-201ENST00000384296 105 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 MIR592-201ENST00000384959 97 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RLIMQ9NVW2 U3.40-201ENST00000408706 208 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.59□□□□□ -1.99
RLIMQ9NVW2 AL139281.1-201ENST00000422120 335 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.59□□□□□ -1.99
RLIMQ9NVW2 MTCO1P5-201ENST00000433573 344 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 AC009238.1-201ENST00000442165 424 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.59□□□□□ -1.99
RLIMQ9NVW2 AC009237.6-201ENST00000446969 424 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 AC016925.1-201ENST00000458303 298 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.59□□□□□ -1.99
RLIMQ9NVW2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RLIMQ9NVW2 AC027419.1-201ENST00000522976 328 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.59□□□□□ -1.99
RLIMQ9NVW2 snoZ196.1-201ENST00000625269 89 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 AC245060.5-201ENST00000610778 3293 ntBASIC2.59□□□□□ -2
RLIMQ9NVW2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
RLIMQ9NVW2 Y_RNA.44-201ENST00000362676 108 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 RNU6-851P-201ENST00000384565 107 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 AL031121.1-201ENST00000406553 254 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 MIR1185-2-201ENST00000408687 86 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 AC139712.2-201ENST00000424302 339 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 RPL39P40-201ENST00000445481 146 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 AL137159.1-201ENST00000452808 512 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 AC018868.1-201ENST00000491307 315 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 AC093259.1-201ENST00000509755 300 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 SNORA4.4-201ENST00000515921 135 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 SNORA9.3-201ENST00000516383 129 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 MIR5195-201ENST00000583555 115 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 AL512605.2-201ENST00000592972 256 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.58□□□□□ -2
RLIMQ9NVW2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RLIMQ9NVW2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.58□□□□□ -2
RLIMQ9NVW2 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
RLIMQ9NVW2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
RLIMQ9NVW2 SNORD115-30-201ENST00000364117 82 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 Y_RNA.552-201ENST00000384665 112 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 SNORA48.5-201ENST00000391143 135 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 AL031003.1-201ENST00000404229 172 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 RNU2-48P-201ENST00000410694 191 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 EEF1A1P41-201ENST00000414667 207 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 AC108059.2-201ENST00000434626 151 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 AC091959.1-201ENST00000495857 238 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 SCARNA13-201ENST00000516672 275 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 RNU6-111P-201ENST00000517179 105 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 AC007536.1-201ENST00000533382 349 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 AC022080.3-201ENST00000544433 482 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 MIR3668-201ENST00000582138 75 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 MIR3605-201ENST00000583214 100 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 ZNF861P-201ENST00000588126 639 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 AL449363.1-201ENST00000617815 186 ntBASIC2.57□□□□□ -2
RLIMQ9NVW2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.57□□□□□ -2
RLIMQ9NVW2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.57□□□□□ -2
RLIMQ9NVW2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
RLIMQ9NVW2 SNORA9-201ENST00000384215 133 ntBASIC2.56□□□□□ -2
RLIMQ9NVW2 Y_RNA.478-201ENST00000384358 107 ntBASIC2.56□□□□□ -2
RLIMQ9NVW2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.56□□□□□ -2
RLIMQ9NVW2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.56□□□□□ -2
RLIMQ9NVW2 AC010531.2-201ENST00000465012 153 ntBASIC2.56□□□□□ -2
RLIMQ9NVW2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.56□□□□□ -2
RLIMQ9NVW2 RNU6-436P-201ENST00000516171 114 ntBASIC2.56□□□□□ -2
RLIMQ9NVW2 RNU6-948P-201ENST00000516374 107 ntBASIC2.56□□□□□ -2
RLIMQ9NVW2 SNORA74D-201ENST00000516404 141 ntBASIC2.56□□□□□ -2
RLIMQ9NVW2 U6.115-201ENST00000636045 103 ntBASIC2.56□□□□□ -2
RLIMQ9NVW2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.56□□□□□ -2
RLIMQ9NVW2 AC073346.2-201ENST00000624724 2058 ntBASIC2.56□□□□□ -2
RLIMQ9NVW2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.55□□□□□ -2
RLIMQ9NVW2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.55□□□□□ -2
RLIMQ9NVW2 RNU1-91P-201ENST00000364746 163 ntBASIC2.55□□□□□ -2
RLIMQ9NVW2 RNU6-338P-201ENST00000383888 105 ntBASIC2.55□□□□□ -2
RLIMQ9NVW2 RNU6-662P-201ENST00000384253 104 ntBASIC2.55□□□□□ -2
RLIMQ9NVW2 MIR887-201ENST00000401258 79 ntBASIC2.55□□□□□ -2
RLIMQ9NVW2 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.55□□□□□ -2
RLIMQ9NVW2 AL139132.1-201ENST00000431587 344 ntBASIC2.55□□□□□ -2
RLIMQ9NVW2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.55□□□□□ -2
RLIMQ9NVW2 PRELID3BP1-201ENST00000457142 540 ntBASIC2.55□□□□□ -2
RLIMQ9NVW2 RPS27AP9-201ENST00000477681 438 ntBASIC2.55□□□□□ -2
RLIMQ9NVW2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.55□□□□□ -2
RLIMQ9NVW2 AC096644.4-201ENST00000563417 2912 ntBASIC2.55□□□□□ -2
RLIMQ9NVW2 MIR3200-201ENST00000580767 85 ntBASIC2.55□□□□□ -2
RLIMQ9NVW2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.55□□□□□ -2
RLIMQ9NVW2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
RLIMQ9NVW2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.55□□□□□ -2
RLIMQ9NVW2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
RLIMQ9NVW2 MIR26A1-201ENST00000362205 77 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 Y_RNA.20-201ENST00000362479 113 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 Y_RNA.117-201ENST00000363294 101 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 Y_RNA.136-201ENST00000363444 102 ntBASIC2.54□□□□□ -2
RLIMQ9NVW2 Y_RNA.257-201ENST00000364596 102 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms