Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MRPS35P2-201ENST00000508242 191 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 RNU6-1041P-201ENST00000516254 102 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 ELOCP29-201ENST00000588193 334 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LIN7CQ9NUP9 Y_RNA.183-201ENST00000363882 113 ntBASIC2.22□□□□□ -2.05
LIN7CQ9NUP9 Y_RNA.230-201ENST00000364348 109 ntBASIC2.22□□□□□ -2.05
LIN7CQ9NUP9 Y_RNA.462-201ENST00000384268 102 ntBASIC2.22□□□□□ -2.05
LIN7CQ9NUP9 AC008134.1-201ENST00000420943 193 ntBASIC2.22□□□□□ -2.05
LIN7CQ9NUP9 ELOCP20-201ENST00000422460 345 ntBASIC2.22□□□□□ -2.05
LIN7CQ9NUP9 AC011406.1-201ENST00000512440 370 ntBASIC2.22□□□□□ -2.05
LIN7CQ9NUP9 SNORA31.15-201ENST00000516771 132 ntBASIC2.22□□□□□ -2.05
LIN7CQ9NUP9 SNORA40.15-201ENST00000516884 107 ntBASIC2.22□□□□□ -2.05
LIN7CQ9NUP9 AC009127.3-201ENST00000570531 403 ntBASIC2.22□□□□□ -2.05
LIN7CQ9NUP9 AC136932.1-201ENST00000574771 208 ntBASIC2.22□□□□□ -2.05
LIN7CQ9NUP9 MIR4635-201ENST00000583759 79 ntBASIC2.22□□□□□ -2.05
LIN7CQ9NUP9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
LIN7CQ9NUP9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 RNU6-1266P-201ENST00000362794 105 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 Y_RNA.214-201ENST00000364201 112 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 RNU6-1240P-201ENST00000365155 104 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 RNU6-1175P-201ENST00000365200 107 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 Y_RNA.459-201ENST00000384251 102 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 Y_RNA.570-201ENST00000384750 101 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 SNORD23.1-201ENST00000408212 104 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 RNU5A-5P-201ENST00000411054 116 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 AC105272.1-201ENST00000438604 198 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 ATP5J2P3-201ENST00000451550 258 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 MTND5P22-201ENST00000458380 195 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 AL049873.1-201ENST00000480540 376 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 RNY3P15-201ENST00000516297 97 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 MIR5092-201ENST00000583139 88 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 U2.15-201ENST00000611544 191 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 MIR7106-201ENST00000612419 65 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 U2.16-201ENST00000613119 191 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 U2.12-201ENST00000613778 191 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 U2.20-201ENST00000613956 192 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 U2.9-201ENST00000615427 191 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 U2.11-201ENST00000616345 191 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 U2.2-201ENST00000616535 191 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 U2.3-201ENST00000617785 191 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 U2.19-201ENST00000618602 191 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 RNU2-1-201ENST00000618664 191 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 U2.6-201ENST00000619225 191 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 U2.5-201ENST00000619465 191 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 U2.10-201ENST00000620268 191 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 AC012640.5-201ENST00000623897 319 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 AC006386.2-201ENST00000624491 75 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 AC012005.1-201ENST00000624575 75 ntBASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.21□□□□□ -2.06
LIN7CQ9NUP9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 Y_RNA.105-201ENST00000363182 111 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 MIR9-1-201ENST00000385198 89 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 RNA5SP465-201ENST00000391195 109 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 MIR1253-201ENST00000408273 105 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 RNA5SP21-201ENST00000410917 96 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 AL353689.1-201ENST00000438895 199 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 SNORD65B-201ENST00000459126 73 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 RN7SL636P-201ENST00000497504 294 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 RNU6-966P-201ENST00000516479 104 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 RNU7-110P-201ENST00000516891 62 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 SUMO2P18-201ENST00000518873 252 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 AC027419.1-201ENST00000522976 328 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 EIF4BP1-201ENST00000554881 351 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 MIR4529-201ENST00000578110 78 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 MIR4423-201ENST00000580922 80 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 RPL12P50-201ENST00000603116 116 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 AC136443.5-201ENST00000603741 370 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 AC011373.1-201ENST00000607270 237 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 MIR376A1-201ENST00000616574 68 ntBASIC2.2□□□□□ -2.06
LIN7CQ9NUP9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LIN7CQ9NUP9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LIN7CQ9NUP9 Y_RNA.26-201ENST00000362539 101 ntBASIC2.19□□□□□ -2.06
LIN7CQ9NUP9 RNU6-770P-201ENST00000363929 105 ntBASIC2.19□□□□□ -2.06
LIN7CQ9NUP9 RNU6-806P-201ENST00000365147 105 ntBASIC2.19□□□□□ -2.06
LIN7CQ9NUP9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.19□□□□□ -2.06
LIN7CQ9NUP9 Y_RNA.446-201ENST00000384178 104 ntBASIC2.19□□□□□ -2.06
LIN7CQ9NUP9 SNORD63-201ENST00000384262 68 ntBASIC2.19□□□□□ -2.06
LIN7CQ9NUP9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LIN7CQ9NUP9 RPL21P1-201ENST00000399532 476 ntBASIC2.19□□□□□ -2.06
LIN7CQ9NUP9 AL138827.1-201ENST00000402666 306 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms