Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 AL355297.2-201ENST00000604792 129 ntBASIC5.61□□□□□ -1.51
FOXD4L1Q9NU39 AC006160.2-201ENST00000637708 154 ntBASIC5.61□□□□□ -1.51
FOXD4L1Q9NU39 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXD4L1Q9NU39 AC245060.5-201ENST00000610778 3293 ntBASIC5.61□□□□□ -1.51
FOXD4L1Q9NU39 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 MAPK10-303ENST00000641324 3959 ntBASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 Y_RNA.4-201ENST00000362333 112 ntBASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 SNORA1.1-201ENST00000364671 133 ntBASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 RNU6-163P-201ENST00000384396 106 ntBASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 MIR561-201ENST00000385216 97 ntBASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 AL645608.4-201ENST00000423619 154 ntBASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 RN7SL504P-201ENST00000494496 287 ntBASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXD4L1Q9NU39 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 RNA5SP322-201ENST00000363617 119 ntBASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 Y_RNA.171-201ENST00000363760 102 ntBASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 RNU6-171P-201ENST00000384354 107 ntBASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 Z74021.1-201ENST00000423610 407 ntBASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 AL135938.1-201ENST00000443141 297 ntBASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 RN7SL222P-201ENST00000476452 299 ntBASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 AC114811.1-201ENST00000507207 168 ntBASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 SNORA31.4-201ENST00000516049 129 ntBASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 MIR3691-201ENST00000578066 90 ntBASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 MIR1269B-201ENST00000580405 75 ntBASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 AL121932.1-201ENST00000605542 214 ntBASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 DHX9P1-201ENST00000436565 3076 ntBASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.59□□□□□ -1.51
FOXD4L1Q9NU39 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
FOXD4L1Q9NU39 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 SNORD58A-201ENST00000383875 65 ntBASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 MIR592-201ENST00000384959 97 ntBASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 U8.15-201ENST00000390947 134 ntBASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 RN7SKP167-201ENST00000411047 285 ntBASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 snoU13.20-201ENST00000459180 104 ntBASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 RNA5SP33-201ENST00000516687 98 ntBASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 IGLV3-17-201ENST00000519099 244 ntBASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 MIR3152-201ENST00000579801 74 ntBASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
FOXD4L1Q9NU39 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXD4L1Q9NU39 Y_RNA.99-201ENST00000363138 105 ntBASIC5.57□□□□□ -1.52
FOXD4L1Q9NU39 SNORA74A-201ENST00000364089 198 ntBASIC5.57□□□□□ -1.52
FOXD4L1Q9NU39 RNU6-788P-201ENST00000390967 104 ntBASIC5.57□□□□□ -1.52
FOXD4L1Q9NU39 TRIAP1P1-201ENST00000427062 225 ntBASIC5.57□□□□□ -1.52
FOXD4L1Q9NU39 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXD4L1Q9NU39 RNA5SP73-201ENST00000516744 108 ntBASIC5.57□□□□□ -1.52
FOXD4L1Q9NU39 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXD4L1Q9NU39 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXD4L1Q9NU39 ZNF962P-201ENST00000443465 3140 ntBASIC5.57□□□□□ -1.52
FOXD4L1Q9NU39 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
FOXD4L1Q9NU39 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.57□□□□□ -1.52
FOXD4L1Q9NU39 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 RNU6-1313P-201ENST00000362622 102 ntBASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 SNORD115-2-201ENST00000362842 82 ntBASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 SNORD115-20-201ENST00000365099 82 ntBASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 Y_RNA.430-201ENST00000384081 110 ntBASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 MIR143-201ENST00000385300 106 ntBASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 U3.30-201ENST00000391308 210 ntBASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 Y_RNA.607-201ENST00000410597 98 ntBASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 BX510359.3-201ENST00000422168 306 ntBASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 UBL5P3-201ENST00000475112 231 ntBASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 AC007536.1-201ENST00000533382 349 ntBASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 ELOCP29-201ENST00000588193 334 ntBASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 AC091979.2-201ENST00000607514 214 ntBASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 MIR548BB-201ENST00000626714 66 ntBASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXD4L1Q9NU39 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXD4L1Q9NU39 RNA5SP502-201ENST00000362694 119 ntBASIC5.55□□□□□ -1.52
FOXD4L1Q9NU39 RNU1-106P-201ENST00000384382 164 ntBASIC5.55□□□□□ -1.52
FOXD4L1Q9NU39 RNU6-160P-201ENST00000384591 107 ntBASIC5.55□□□□□ -1.52
FOXD4L1Q9NU39 RN7SL172P-201ENST00000460535 303 ntBASIC5.55□□□□□ -1.52
FOXD4L1Q9NU39 AC008953.1-201ENST00000497334 318 ntBASIC5.55□□□□□ -1.52
FOXD4L1Q9NU39 AC023141.11-201ENST00000508864 202 ntBASIC5.55□□□□□ -1.52
FOXD4L1Q9NU39 RPPH1-2P-201ENST00000516688 293 ntBASIC5.55□□□□□ -1.52
FOXD4L1Q9NU39 MIR548AE2-201ENST00000583456 67 ntBASIC5.55□□□□□ -1.52
FOXD4L1Q9NU39 MIR4443-201ENST00000585052 53 ntBASIC5.55□□□□□ -1.52
FOXD4L1Q9NU39 AC006130.2-201ENST00000586202 326 ntBASIC5.55□□□□□ -1.52
FOXD4L1Q9NU39 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms