Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 RNU6-1186P-201ENST00000410429 97 ntBASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 RN7SKP142-201ENST00000411236 328 ntBASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 AC063976.4-201ENST00000421971 163 ntBASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 AL606489.2-201ENST00000433886 234 ntBASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 AC002429.1-201ENST00000437672 148 ntBASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 SRRM1P2-201ENST00000464531 1192 ntBASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 RPL23AP75-201ENST00000491601 451 ntBASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 AC105758.1-201ENST00000506038 399 ntBASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 SNORA31.4-201ENST00000516049 129 ntBASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 MTATP6P24-201ENST00000576835 677 ntBASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 AC080078.2-201ENST00000603766 501 ntBASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 AC137590.2-201ENST00000619709 240 ntBASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
SDHAF3Q9NRP4 RNU6-82P-201ENST00000363970 107 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 RNU6-38P-201ENST00000384085 107 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 MIR521-1-201ENST00000384902 87 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 MIR660-201ENST00000385235 97 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 AC073464.1-201ENST00000429823 534 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 AC245047.7-201ENST00000440265 293 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 AL359672.1-201ENST00000442302 409 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 USP9YP29-201ENST00000445112 563 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 SNORD79.1-201ENST00000516069 84 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 AK6P2-201ENST00000549020 471 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 FRG2DP-202ENST00000566967 323 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 AC004584.2-201ENST00000570407 410 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 MIR4778-201ENST00000577635 80 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 GHRLOS.1-201ENST00000610995 70 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 MIR8076-201ENST00000611401 83 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.68□□□□□ -2.3
SDHAF3Q9NRP4 RNU4-76P-201ENST00000364509 141 ntBASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 SNORD87-201ENST00000364849 89 ntBASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 RNU4-20P-201ENST00000365601 151 ntBASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 CDK8P2-201ENST00000415020 547 ntBASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 MTCO2P16-201ENST00000436962 677 ntBASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 SNORA40.12-201ENST00000516329 111 ntBASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 AC090142.3-201ENST00000519012 385 ntBASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 AL590705.4-201ENST00000532209 134 ntBASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 SNORD11B-201ENST00000607707 90 ntBASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 AC073349.3-201ENST00000617616 186 ntBASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 U6.73-201ENST00000619194 103 ntBASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.67□□□□□ -2.3
SDHAF3Q9NRP4 Y_RNA.167-201ENST00000363735 109 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 MIR200A-201ENST00000384875 90 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 MIR653-201ENST00000385279 96 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 SNORD12-201ENST00000391002 90 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 AF228730.1-201ENST00000397972 663 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 AL034345.1-201ENST00000407768 123 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 MIR320B2-201ENST00000408479 138 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 MRPS10P2-201ENST00000431226 381 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 RPS29P1-201ENST00000465274 159 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 RPS26P48-201ENST00000491713 339 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 SNORA19.2-201ENST00000516013 114 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 CYP3A137P-201ENST00000562436 69 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 FAM157A-202ENST00000615155 405 ntBASIC0.66□□□□□ -2.3
SDHAF3Q9NRP4 AP000568.1-201ENST00000282964 442 ntBASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-969P-201ENST00000383900 105 ntBASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 AL355796.1-201ENST00000406706 323 ntBASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 MIR1185-2-201ENST00000408687 86 ntBASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 BET1P1-201ENST00000482276 359 ntBASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-322P-201ENST00000516010 103 ntBASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 RNU7-99P-201ENST00000516271 62 ntBASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-917P-201ENST00000516294 104 ntBASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 AL121579.1-201ENST00000555129 305 ntBASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 AC133485.1-201ENST00000567176 124 ntBASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 AC138907.6-201ENST00000568401 126 ntBASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 AC092807.2-201ENST00000609367 243 ntBASIC0.65□□□□□ -2.31
SDHAF3Q9NRP4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 SNORD50.1-201ENST00000362987 71 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 Y_RNA.224-201ENST00000364308 111 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 Y_RNA.238-201ENST00000364441 102 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 RNU4-66P-201ENST00000365199 138 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 SNORA75-201ENST00000384158 137 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-17P-201ENST00000384245 107 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-18P-201ENST00000384527 107 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 SNORD37.1-201ENST00000390968 65 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 Z82188.1-201ENST00000436709 154 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 STAG3L5P-204ENST00000443759 179 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms