Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.18□□□□□ -2.22
CCL28Q9NRJ3 AC024995.1-201ENST00000523014 93 ntBASIC1.18□□□□□ -2.22
CCL28Q9NRJ3 CBX3P8-201ENST00000532412 525 ntBASIC1.18□□□□□ -2.22
CCL28Q9NRJ3 AK6P2-201ENST00000549020 471 ntBASIC1.18□□□□□ -2.22
CCL28Q9NRJ3 SNORD53B-201ENST00000577887 78 ntBASIC1.18□□□□□ -2.22
CCL28Q9NRJ3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.18□□□□□ -2.22
CCL28Q9NRJ3 AC080078.2-201ENST00000603766 501 ntBASIC1.18□□□□□ -2.22
CCL28Q9NRJ3 AC100812.1-201ENST00000607622 580 ntBASIC1.18□□□□□ -2.22
CCL28Q9NRJ3 MIR7974-201ENST00000615835 79 ntBASIC1.18□□□□□ -2.22
CCL28Q9NRJ3 AL133216.2-202ENST00000634512 349 ntBASIC1.18□□□□□ -2.22
CCL28Q9NRJ3 AC100821.1-201ENST00000523153 2479 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 Y_RNA.179-201ENST00000363844 90 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 SNORA67.6-201ENST00000391093 99 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 RNU1-139P-201ENST00000391307 165 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 MIR548F5-201ENST00000408421 86 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 MIR1185-2-201ENST00000408687 86 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 RPS3AP52-201ENST00000435639 297 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 AC073910.1-201ENST00000445047 438 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 RNU6-1114P-201ENST00000516022 107 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 AC015720.1-201ENST00000565251 277 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 MIR5695-201ENST00000579717 85 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 MIR3683-201ENST00000580847 82 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 MIR4422-201ENST00000581938 83 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 AL355802.3-201ENST00000607571 545 ntBASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.17□□□□□ -2.22
CCL28Q9NRJ3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 RNU6-222P-201ENST00000362438 107 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 Y_RNA.48-201ENST00000362710 103 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 U8.1-201ENST00000362843 134 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 RNA5SP323-201ENST00000391094 133 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 AC074085.1-201ENST00000413598 418 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 AL161935.2-201ENST00000414627 60 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 USP9YP16-201ENST00000430287 407 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 HSPE1P24-201ENST00000450782 238 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 AC107399.1-201ENST00000451226 265 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 USP9YP23-201ENST00000455085 407 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 AC018710.1-201ENST00000506509 158 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 SNORA31.24-201ENST00000517232 57 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 MIR5701-3-201ENST00000578890 82 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 MIR5701-1-201ENST00000585138 82 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 AC011712.1-201ENST00000588959 234 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 AC010999.1-201ENST00000611856 324 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 AC084782.3-201ENST00000612282 578 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 MIR5701-2-201ENST00000615634 82 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 AC098679.4-201ENST00000624241 654 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 ICE2P2-201ENST00000483823 2787 ntBASIC1.16□□□□□ -2.22
CCL28Q9NRJ3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 MIR302D-201ENST00000362275 68 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 RNU6-1266P-201ENST00000362794 105 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 RNU4-13P-201ENST00000364019 141 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 RNU6-60P-201ENST00000364792 103 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 RNA5SP126-201ENST00000365092 109 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 RNA5SP467-201ENST00000391274 118 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 SNORA26.9-201ENST00000391322 122 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 Y_RNA.594-201ENST00000410373 140 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 COX6CP10-201ENST00000416832 224 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 CYCSP49-201ENST00000420810 319 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 MIR4709-201ENST00000577272 72 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 AC022432.1-201ENST00000595739 310 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 MZT1P2-201ENST00000604387 248 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 AC005014.2-201ENST00000607795 599 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 AL359075.3-201ENST00000613288 217 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 MIR8063-201ENST00000621930 81 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 AC095038.3-201ENST00000634439 195 ntBASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
CCL28Q9NRJ3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 Y_RNA.106-201ENST00000363189 100 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 RNU6-271P-201ENST00000363858 105 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 RNA5SP190-201ENST00000365222 118 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 SNORA4.2-201ENST00000365313 147 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 Y_RNA.339-201ENST00000365325 102 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 Y_RNA.473-201ENST00000384333 102 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 RNU1-78P-201ENST00000391248 165 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 RNU6-1050P-201ENST00000410388 107 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 AC007677.1-201ENST00000445757 515 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 AC245517.4-201ENST00000448601 281 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 AL163195.1-201ENST00000496941 348 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 HMGN1P12-201ENST00000499125 195 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 AC103851.1-201ENST00000506833 274 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 RNA5SP445-201ENST00000515889 115 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 Y_RNA.670-201ENST00000516255 105 ntBASIC1.14□□□□□ -2.23
CCL28Q9NRJ3 Y_RNA.683-201ENST00000516508 93 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms