Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 Y_RNA.691-201ENST00000516611 103 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 RNU1-54P-201ENST00000517181 120 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.61□□□□□ -2.15
HPS4Q9NQG7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.61□□□□□ -2.15
HPS4Q9NQG7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.61□□□□□ -2.15
HPS4Q9NQG7 RRN3P3-201ENST00000549207 578 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 AC015720.1-201ENST00000565251 277 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 MIR4753-201ENST00000585119 83 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 SNRPGP20-201ENST00000604477 205 ntBASIC1.61□□□□□ -2.15
HPS4Q9NQG7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
HPS4Q9NQG7 MIR126-201ENST00000362291 85 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 RNU6-862P-201ENST00000362804 105 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 RNU4-13P-201ENST00000364019 141 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 Y_RNA.533-201ENST00000384596 114 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 SNORA67.6-201ENST00000391093 99 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 AC004965.1-201ENST00000413033 213 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 AC074085.1-201ENST00000413598 418 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.6□□□□□ -2.15
HPS4Q9NQG7 Z82188.1-201ENST00000436709 154 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 AC009237.7-201ENST00000447357 229 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 MTND3P10-201ENST00000450967 341 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 AC107399.1-201ENST00000451226 265 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 ACA59.1-201ENST00000515966 143 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 Y_RNA.670-201ENST00000516255 105 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 RNU6-1016P-201ENST00000516689 94 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 RNU6-856P-201ENST00000516959 98 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.6□□□□□ -2.15
HPS4Q9NQG7 AC018462.2-201ENST00000605375 395 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 BX248123.2-201ENST00000606318 124 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 AL359697.1-201ENST00000624879 587 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 SCARNA4-201ENST00000629045 128 ntBASIC1.6□□□□□ -2.15
HPS4Q9NQG7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.6□□□□□ -2.15
HPS4Q9NQG7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HPS4Q9NQG7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
HPS4Q9NQG7 Y_RNA.48-201ENST00000362710 103 ntBASIC1.59□□□□□ -2.15
HPS4Q9NQG7 RNU6-601P-201ENST00000384540 107 ntBASIC1.59□□□□□ -2.15
HPS4Q9NQG7 RNU6-296P-201ENST00000384608 107 ntBASIC1.59□□□□□ -2.15
HPS4Q9NQG7 Y_RNA.594-201ENST00000410373 140 ntBASIC1.59□□□□□ -2.15
HPS4Q9NQG7 RPL37P10-201ENST00000412884 288 ntBASIC1.59□□□□□ -2.15
HPS4Q9NQG7 AC060773.1-201ENST00000421698 310 ntBASIC1.59□□□□□ -2.15
HPS4Q9NQG7 SNORD5.1-201ENST00000458800 75 ntBASIC1.59□□□□□ -2.15
HPS4Q9NQG7 RNU6-1041P-201ENST00000516254 102 ntBASIC1.59□□□□□ -2.15
HPS4Q9NQG7 RNU6-1213P-201ENST00000517075 94 ntBASIC1.59□□□□□ -2.15
HPS4Q9NQG7 UBE2V2P2-201ENST00000587677 504 ntBASIC1.59□□□□□ -2.15
HPS4Q9NQG7 AC016925.2-201ENST00000605108 242 ntBASIC1.59□□□□□ -2.15
HPS4Q9NQG7 AC092794.2-201ENST00000620933 563 ntBASIC1.59□□□□□ -2.15
HPS4Q9NQG7 BX322639.1-202ENST00000423987 2213 ntBASIC1.59□□□□□ -2.16
HPS4Q9NQG7 ZNF204P-201ENST00000416749 2397 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 RNU6-439P-201ENST00000384188 106 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 Y_RNA.474-201ENST00000384341 102 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 RNU6-1304P-201ENST00000411374 106 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 AC016717.1-201ENST00000448918 286 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 AC009474.2-201ENST00000451383 136 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 RPL7P42-201ENST00000481005 679 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.58□□□□□ -2.16
HPS4Q9NQG7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.58□□□□□ -2.16
HPS4Q9NQG7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.58□□□□□ -2.16
HPS4Q9NQG7 RNU6-948P-201ENST00000516374 107 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 RNU2-34P-201ENST00000516534 121 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 RNA5SP384-201ENST00000516615 116 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 AC105029.1-201ENST00000520250 669 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.58□□□□□ -2.16
HPS4Q9NQG7 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 AC009229.3-201ENST00000608056 282 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.58□□□□□ -2.16
HPS4Q9NQG7 AL391987.6-201ENST00000305671 199 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 Y_RNA.142-201ENST00000363491 102 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HPS4Q9NQG7 Y_RNA.404-201ENST00000383978 102 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 RNU6-975P-201ENST00000384296 105 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 AL117342.1-201ENST00000404861 406 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 MIR320B2-201ENST00000408479 138 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 RNU6-1050P-201ENST00000410388 107 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 RN7SKP51-201ENST00000410781 304 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 AC243428.1-201ENST00000421099 264 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 MTATP6P23-201ENST00000440153 476 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 MTND4P18-201ENST00000447010 465 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.57□□□□□ -2.16
HPS4Q9NQG7 HMGN2P9-201ENST00000476875 229 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 RPL30P10-201ENST00000488148 337 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 RNU6-875P-201ENST00000516488 106 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 CBX3P8-201ENST00000532412 525 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 MIR5696-201ENST00000578474 85 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.57□□□□□ -2.16
HPS4Q9NQG7 AC068205.3-201ENST00000636385 468 ntBASIC1.57□□□□□ -2.16
HPS4Q9NQG7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.56□□□□□ -2.16
HPS4Q9NQG7 RNU6-1305P-201ENST00000364353 104 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 RNU4-9P-201ENST00000364951 139 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 Y_RNA.482-201ENST00000384377 111 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 RNU6-1235P-201ENST00000384559 107 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 MIR32-201ENST00000384965 70 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 RNU6-370P-201ENST00000411008 104 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 MTCO3P29-201ENST00000432119 779 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 RNU6-498P-201ENST00000459468 107 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 AC114982.1-201ENST00000469402 321 ntBASIC1.56□□□□□ -2.16
HPS4Q9NQG7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms