Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
ZFYVE28Q9HCC9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ZFYVE28Q9HCC9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
ZFYVE28Q9HCC9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ZFYVE28Q9HCC9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.72□□□□□ -1.81
ZFYVE28Q9HCC9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ZFYVE28Q9HCC9 SNORD114-7-201ENST00000362520 77 ntBASIC3.71□□□□□ -1.82
ZFYVE28Q9HCC9 RNU6-486P-201ENST00000363116 107 ntBASIC3.71□□□□□ -1.82
ZFYVE28Q9HCC9 RNU7-141P-201ENST00000459304 62 ntBASIC3.71□□□□□ -1.82
ZFYVE28Q9HCC9 RNU7-14P-201ENST00000459331 62 ntBASIC3.71□□□□□ -1.82
ZFYVE28Q9HCC9 RPL23AP67-201ENST00000465341 474 ntBASIC3.71□□□□□ -1.82
ZFYVE28Q9HCC9 HMGN2P9-201ENST00000476875 229 ntBASIC3.71□□□□□ -1.82
ZFYVE28Q9HCC9 SNORD116-25-201ENST00000516517 92 ntBASIC3.71□□□□□ -1.82
ZFYVE28Q9HCC9 RNU6-62P-201ENST00000516526 102 ntBASIC3.71□□□□□ -1.82
ZFYVE28Q9HCC9 GTF3AP2-201ENST00000557014 266 ntBASIC3.71□□□□□ -1.82
ZFYVE28Q9HCC9 MIR4753-201ENST00000585119 83 ntBASIC3.71□□□□□ -1.82
ZFYVE28Q9HCC9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ZFYVE28Q9HCC9 AC068700.1-201ENST00000565862 3754 ntBASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 RNU6-144P-201ENST00000383951 107 ntBASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 MIR526A2-201ENST00000390198 65 ntBASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 MIR1283-1-201ENST00000408494 87 ntBASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 AC022018.1-201ENST00000430685 241 ntBASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 AC114982.1-201ENST00000469402 321 ntBASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 MIR2682-201ENST00000580305 110 ntBASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 AL513302.2-201ENST00000562313 1842 ntBASIC3.7□□□□□ -1.82
ZFYVE28Q9HCC9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 AC103988.1-201ENST00000566382 2177 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 RNU1-70P-201ENST00000362618 164 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 RNU6-969P-201ENST00000383900 105 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 RNU6-959P-201ENST00000384671 107 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 RNU6-376P-201ENST00000384731 106 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 MIR616-201ENST00000385293 97 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 AC126124.2-201ENST00000413542 321 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 ARF4P2-201ENST00000430209 526 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 HSPE1P21-201ENST00000438283 308 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 RPS4XP2-201ENST00000458402 793 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 RNU7-57P-201ENST00000459540 60 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 AC107027.2-201ENST00000512197 115 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 RNU7-121P-201ENST00000516604 62 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 AC022616.8-201ENST00000533569 253 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 ELOCP29-201ENST00000588193 334 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 uc_338.1-201ENST00000612113 180 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 UCA1.1-201ENST00000620952 75 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 AC022149.2-201ENST00000621061 203 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 MIR622-201ENST00000638396 96 ntBASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.69□□□□□ -1.82
ZFYVE28Q9HCC9 AC017071.1-201ENST00000564407 2204 ntBASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 MAPK10-362ENST00000641864 4484 ntBASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 RNA5SP432-201ENST00000362480 116 ntBASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 RNU6-417P-201ENST00000384712 107 ntBASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 Y_RNA.572-201ENST00000384757 98 ntBASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 AL139095.1-201ENST00000404326 391 ntBASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 EEF1A1P41-201ENST00000414667 207 ntBASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 AC091826.1-201ENST00000514065 313 ntBASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 MIR449C-201ENST00000516047 92 ntBASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 AC109810.1-201ENST00000534066 224 ntBASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ZFYVE28Q9HCC9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 MIR873-201ENST00000401120 77 ntBASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 RN7SKP220-201ENST00000410611 288 ntBASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 RNU6-1007P-201ENST00000516586 107 ntBASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 MIR4724-201ENST00000579485 89 ntBASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 MIR548X2-201ENST00000579776 100 ntBASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZFYVE28Q9HCC9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.66□□□□□ -1.82
ZFYVE28Q9HCC9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.66□□□□□ -1.82
ZFYVE28Q9HCC9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZFYVE28Q9HCC9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ZFYVE28Q9HCC9 RNU6-22P-201ENST00000384355 107 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms