Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MAPK10-362ENST00000641864 4484 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 AC026241.1-201ENST00000517873 2142 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 AL136164.4-201ENST00000625013 2135 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 SNORD20-201ENST00000384550 80 ntBASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 MIR616-201ENST00000385293 97 ntBASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 RNA5SP120-201ENST00000410900 112 ntBASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 RPL32P35-201ENST00000415214 394 ntBASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 AC008267.6-201ENST00000441664 139 ntBASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 RN7SL601P-201ENST00000471221 293 ntBASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 AC117454.1-201ENST00000491120 168 ntBASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 RNU5F-4P-201ENST00000516581 114 ntBASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 AC079598.5-201ENST00000547460 117 ntBASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 AL138880.2-201ENST00000616214 239 ntBASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 AC006111.3-201ENST00000622137 383 ntBASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 AC068647.2-201ENST00000637380 353 ntBASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SEC61A2Q9H9S3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 Y_RNA.218-201ENST00000364218 104 ntBASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 Y_RNA.229-201ENST00000364347 113 ntBASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 U8.7-201ENST00000364940 136 ntBASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 RNU6-407P-201ENST00000365280 104 ntBASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 Y_RNA.337-201ENST00000365312 102 ntBASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 Y_RNA.542-201ENST00000384641 111 ntBASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 RPL21P3-201ENST00000395517 478 ntBASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 RNU6-1333P-201ENST00000516162 93 ntBASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 SNORA31.21-201ENST00000517180 77 ntBASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 ZNF702P-202ENST00000434269 1966 ntBASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SEC61A2Q9H9S3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 AC010680.1-201ENST00000590024 3590 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 MIR367-201ENST00000362299 68 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 Y_RNA.71-201ENST00000362892 104 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 SNORA51.4-201ENST00000364993 124 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 Y_RNA.420-201ENST00000384043 110 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 SNORD14D-201ENST00000384390 87 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 MIR15B-201ENST00000385045 98 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 MIR526A2-201ENST00000390198 65 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 AL606845.1-201ENST00000404881 255 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 AC097463.2-201ENST00000421074 142 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 AC244505.4-201ENST00000434905 287 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 SSXP5-201ENST00000443473 287 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 RNA5SP217-201ENST00000515959 91 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 SNORA70.12-201ENST00000516084 153 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 AC027419.1-201ENST00000522976 328 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 AC112693.2-201ENST00000556538 232 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 MIR4724-201ENST00000579485 89 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 RPL30P11-203ENST00000598995 310 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 AL161756.2-201ENST00000604597 246 ntBASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.86□□□□□ -1.95
SEC61A2Q9H9S3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 AC000403.1-201ENST00000613696 3585 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 RNA5SP205-201ENST00000364653 136 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 Y_RNA.361-201ENST00000365515 120 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 AL139095.1-201ENST00000404326 391 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 MIR1185-2-201ENST00000408687 86 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 Y_RNA.629-201ENST00000411368 105 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 CYCSP49-201ENST00000420810 319 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 EIF4EP4-201ENST00000424916 578 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 TRIAP1P1-201ENST00000427062 225 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 AC114982.1-201ENST00000469402 321 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 HMGN2P9-201ENST00000476875 229 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 AC008739.2-201ENST00000597006 317 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 AL359881.1-201ENST00000602916 267 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 uc_338.14-201ENST00000613162 166 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 MIR3651-201ENST00000630427 90 ntBASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.85□□□□□ -1.95
SEC61A2Q9H9S3 AL391516.1-201ENST00000554380 2449 ntBASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 AC007256.1-201ENST00000392253 2765 ntBASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SEC61A2Q9H9S3 Y_RNA.127-201ENST00000363386 109 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms