Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RN7SL636P-201ENST00000497504 294 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 RNU7-110P-201ENST00000516891 62 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 RNU6-58P-201ENST00000517143 103 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.58□□□□□ -2
EBF3Q9H4W6 MIR5571-201ENST00000577998 113 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 AC008749.1-201ENST00000597650 306 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 Z83818.1-201ENST00000603584 150 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 AC010889.1-201ENST00000566193 2666 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 RBBP8P1-201ENST00000449447 1844 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
EBF3Q9H4W6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.57□□□□□ -2
EBF3Q9H4W6 AL359854.1-201ENST00000614203 1594 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
EBF3Q9H4W6 Z82195.2-201ENST00000612348 18351 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 RNU6-923P-201ENST00000364753 107 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 Y_RNA.383-201ENST00000383855 97 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 RNU6-142P-201ENST00000384019 107 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 MIR544A-201ENST00000384855 91 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 RNU2-49P-201ENST00000410666 184 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 AC078809.1-201ENST00000427601 140 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.57□□□□□ -2
EBF3Q9H4W6 snoU13.6-201ENST00000458785 104 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 SNRPGP7-201ENST00000469016 106 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.57□□□□□ -2
EBF3Q9H4W6 RNU6-1278P-201ENST00000516130 107 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.57□□□□□ -2
EBF3Q9H4W6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.57□□□□□ -2
EBF3Q9H4W6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.57□□□□□ -2
EBF3Q9H4W6 AC025281.1-201ENST00000567026 265 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 AL391813.1-201ENST00000603098 260 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.57□□□□□ -2
EBF3Q9H4W6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.57□□□□□ -2
EBF3Q9H4W6 AC110079.1-202ENST00000635213 138 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 AC132825.6-201ENST00000638861 357 ntBASIC2.57□□□□□ -2
EBF3Q9H4W6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
EBF3Q9H4W6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
EBF3Q9H4W6 UBE2WP1-201ENST00000362030 340 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 Y_RNA.82-201ENST00000363000 102 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 Y_RNA.92-201ENST00000363043 102 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 RNU1-105P-201ENST00000363470 161 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 RNU6-1020P-201ENST00000363684 107 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 Y_RNA.235-201ENST00000364412 102 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 Y_RNA.306-201ENST00000365015 102 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 Y_RNA.312-201ENST00000365089 102 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 Y_RNA.322-201ENST00000365151 102 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 RNU6-1175P-201ENST00000365200 107 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 RNA5SP240-201ENST00000365355 128 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 RNU6-804P-201ENST00000384286 107 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 RNU5A-5P-201ENST00000411054 116 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 RNU2-61P-201ENST00000411069 191 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.56□□□□□ -2
EBF3Q9H4W6 Y_RNA.650-201ENST00000459002 102 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 AC107626.1-201ENST00000471084 183 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 AC016632.1-201ENST00000503994 196 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.56□□□□□ -2
EBF3Q9H4W6 SNORA40.9-201ENST00000515895 93 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 Y_RNA.777-201ENST00000516982 102 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 MIR4308-201ENST00000580634 81 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 Y_RNA.771-201ENST00000598668 102 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.56□□□□□ -2
EBF3Q9H4W6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.56□□□□□ -2
EBF3Q9H4W6 Y_RNA.789-201ENST00000622480 102 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 AC002543.1-201ENST00000299783 1954 ntBASIC2.56□□□□□ -2
EBF3Q9H4W6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
EBF3Q9H4W6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
EBF3Q9H4W6 AC092268.1-201ENST00000342691 405 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 MIR410-201ENST00000362222 80 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 SNORA25.1-201ENST00000362326 128 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 RNU6-1285P-201ENST00000363480 105 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 Y_RNA.291-201ENST00000364886 113 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 RNU6-1289P-201ENST00000384431 106 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 RNU6-541P-201ENST00000384709 110 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 RNU6-21P-201ENST00000384710 107 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 MIR549A-201ENST00000385268 96 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 SNORA26.3-201ENST00000391119 136 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
EBF3Q9H4W6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.55□□□□□ -2
EBF3Q9H4W6 AL359511.1-201ENST00000402970 211 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 Y_RNA.590-201ENST00000410140 107 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 CYCSP48-201ENST00000417124 323 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.55□□□□□ -2
EBF3Q9H4W6 RPL39P29-201ENST00000447779 157 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 AL441985.1-201ENST00000457727 251 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 SNORD2.1-201ENST00000458762 69 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 Y_RNA.638-201ENST00000459374 113 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 SEM1P1-201ENST00000506694 209 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 RAC1P5-201ENST00000512182 576 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 RNU7-200P-201ENST00000516105 62 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 SNORA27.4-201ENST00000516650 95 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.55□□□□□ -2
EBF3Q9H4W6 HSPE1P4-201ENST00000550617 308 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.55□□□□□ -2
EBF3Q9H4W6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.55□□□□□ -2
EBF3Q9H4W6 AL078605.1-201ENST00000603529 500 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 AC072026.1-201ENST00000605023 201 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.55□□□□□ -2
EBF3Q9H4W6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.54□□□□□ -2
EBF3Q9H4W6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.54□□□□□ -2
EBF3Q9H4W6 RNA5SP432-201ENST00000362480 116 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms