Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC7.17□□□□□ -1.26
SENP3Q9H4L4 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.17□□□□□ -1.26
SENP3Q9H4L4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SENP3Q9H4L4 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SENP3Q9H4L4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
SENP3Q9H4L4 RNU6-833P-201ENST00000363486 107 ntBASIC7.17□□□□□ -1.26
SENP3Q9H4L4 RNA5SP322-201ENST00000363617 119 ntBASIC7.17□□□□□ -1.26
SENP3Q9H4L4 ATP5A1P2-201ENST00000412323 255 ntBASIC7.17□□□□□ -1.26
SENP3Q9H4L4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC7.17□□□□□ -1.26
SENP3Q9H4L4 RNU6-542P-201ENST00000516405 103 ntBASIC7.17□□□□□ -1.26
SENP3Q9H4L4 MRPL49P2-201ENST00000521066 465 ntBASIC7.17□□□□□ -1.26
SENP3Q9H4L4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC7.17□□□□□ -1.26
SENP3Q9H4L4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
SENP3Q9H4L4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SENP3Q9H4L4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC7.16□□□□□ -1.26
SENP3Q9H4L4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC7.16□□□□□ -1.26
SENP3Q9H4L4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
SENP3Q9H4L4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SENP3Q9H4L4 AC027119.1-201ENST00000440877 241 ntBASIC7.16□□□□□ -1.26
SENP3Q9H4L4 RNA5SP392-201ENST00000516905 112 ntBASIC7.16□□□□□ -1.26
SENP3Q9H4L4 RNA5SP143-201ENST00000516936 115 ntBASIC7.16□□□□□ -1.26
SENP3Q9H4L4 AC005000.2-201ENST00000605468 310 ntBASIC7.16□□□□□ -1.26
SENP3Q9H4L4 MIR6716-201ENST00000613413 80 ntBASIC7.16□□□□□ -1.26
SENP3Q9H4L4 MIR6076-201ENST00000617521 113 ntBASIC7.16□□□□□ -1.26
SENP3Q9H4L4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SENP3Q9H4L4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SENP3Q9H4L4 GVINP1-202ENST00000531871 7271 ntBASIC7.16□□□□□ -1.26
SENP3Q9H4L4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
SENP3Q9H4L4 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SENP3Q9H4L4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC7.15□□□□□ -1.26
SENP3Q9H4L4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SENP3Q9H4L4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.26
SENP3Q9H4L4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SENP3Q9H4L4 RN7SKP145-201ENST00000363291 303 ntBASIC7.15□□□□□ -1.26
SENP3Q9H4L4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
SENP3Q9H4L4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.15□□□□□ -1.27
SENP3Q9H4L4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SENP3Q9H4L4 DHX9P1-201ENST00000436565 3076 ntBASIC7.14□□□□□ -1.27
SENP3Q9H4L4 STX3-208ENST00000641815 3236 ntBASIC7.14□□□□□ -1.27
SENP3Q9H4L4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SENP3Q9H4L4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.14□□□□□ -1.27
SENP3Q9H4L4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SENP3Q9H4L4 AL596028.1-201ENST00000326971 197 ntBASIC7.14□□□□□ -1.27
SENP3Q9H4L4 RNU6-753P-201ENST00000363926 107 ntBASIC7.14□□□□□ -1.27
SENP3Q9H4L4 MIR136-201ENST00000385207 82 ntBASIC7.14□□□□□ -1.27
SENP3Q9H4L4 SNORA77-201ENST00000408716 125 ntBASIC7.14□□□□□ -1.27
SENP3Q9H4L4 RNA5SP251-201ENST00000410614 137 ntBASIC7.14□□□□□ -1.27
SENP3Q9H4L4 CRYBB2P1-203ENST00000415709 538 ntBASIC7.14□□□□□ -1.27
SENP3Q9H4L4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC7.14□□□□□ -1.27
SENP3Q9H4L4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SENP3Q9H4L4 AC079587.1-201ENST00000603846 277 ntBASIC7.14□□□□□ -1.27
SENP3Q9H4L4 Z97988.1-201ENST00000637697 135 ntBASIC7.14□□□□□ -1.27
SENP3Q9H4L4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SENP3Q9H4L4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SENP3Q9H4L4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SENP3Q9H4L4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SENP3Q9H4L4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SENP3Q9H4L4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.13□□□□□ -1.27
SENP3Q9H4L4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
SENP3Q9H4L4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
SENP3Q9H4L4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SENP3Q9H4L4 Y_RNA.510-201ENST00000384511 114 ntBASIC7.13□□□□□ -1.27
SENP3Q9H4L4 RNA5SP109-201ENST00000391010 116 ntBASIC7.13□□□□□ -1.27
SENP3Q9H4L4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SENP3Q9H4L4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
SENP3Q9H4L4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SENP3Q9H4L4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SENP3Q9H4L4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SENP3Q9H4L4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
SENP3Q9H4L4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC7.12□□□□□ -1.27
SENP3Q9H4L4 SNORA2.3-201ENST00000383920 135 ntBASIC7.12□□□□□ -1.27
SENP3Q9H4L4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC7.12□□□□□ -1.27
SENP3Q9H4L4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
SENP3Q9H4L4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SENP3Q9H4L4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SENP3Q9H4L4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SENP3Q9H4L4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SENP3Q9H4L4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SENP3Q9H4L4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.11□□□□□ -1.27
SENP3Q9H4L4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
SENP3Q9H4L4 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.11□□□□□ -1.27
SENP3Q9H4L4 RNU6-957P-201ENST00000363652 99 ntBASIC7.11□□□□□ -1.27
SENP3Q9H4L4 RN7SL636P-201ENST00000497504 294 ntBASIC7.11□□□□□ -1.27
SENP3Q9H4L4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SENP3Q9H4L4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC7.11□□□□□ -1.27
SENP3Q9H4L4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC7.1□□□□□ -1.27
SENP3Q9H4L4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SENP3Q9H4L4 RNU1-59P-201ENST00000364829 162 ntBASIC7.1□□□□□ -1.27
SENP3Q9H4L4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC7.1□□□□□ -1.27
SENP3Q9H4L4 AC099522.1-202ENST00000514718 367 ntBASIC7.1□□□□□ -1.27
SENP3Q9H4L4 SNORA31.9-201ENST00000516429 84 ntBASIC7.1□□□□□ -1.27
SENP3Q9H4L4 AL022401.1-201ENST00000619498 108 ntBASIC7.1□□□□□ -1.27
SENP3Q9H4L4 MIR8054-201ENST00000620877 86 ntBASIC7.1□□□□□ -1.27
SENP3Q9H4L4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.1□□□□□ -1.27
SENP3Q9H4L4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SENP3Q9H4L4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
SENP3Q9H4L4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SENP3Q9H4L4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC7.09□□□□□ -1.27
SENP3Q9H4L4 Y_RNA.537-201ENST00000384626 109 ntBASIC7.09□□□□□ -1.27
SENP3Q9H4L4 MIR452-201ENST00000385020 85 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms