Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 Y_RNA.572-201ENST00000384757 98 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 SNORA26.7-201ENST00000391288 122 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 Y_RNA.595-201ENST00000410403 105 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 RNU7-107P-201ENST00000459121 61 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 AP004217.1-201ENST00000480579 346 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS11Q9H270 SCARNA3-201ENST00000517097 143 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 AC127455.1-201ENST00000565496 145 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 MIR4444-1-201ENST00000581696 74 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 MIR4444-2-201ENST00000584390 74 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 AC008739.3-201ENST00000603262 127 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 AC069294.1-201ENST00000608397 350 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 AC069200.1-201ENST00000609511 323 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 MIR6129-201ENST00000616087 109 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 AC002543.1-201ENST00000299783 1954 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS11Q9H270 AC080128.1-201ENST00000474389 1917 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.09□□□□□ -1.91
VPS11Q9H270 RNU6-801P-201ENST00000364087 105 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 MIR449B-201ENST00000384995 97 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 MIR549A-201ENST00000385268 96 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 SNORA40.19-201ENST00000390846 128 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 RNA5SP344-201ENST00000411081 104 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.09□□□□□ -1.91
VPS11Q9H270 AC112220.1-201ENST00000434628 355 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 AC074290.1-201ENST00000448883 135 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 RPS20P10-201ENST00000451209 253 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 AC092991.1-201ENST00000477176 376 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.09□□□□□ -1.91
VPS11Q9H270 SCARNA8-201ENST00000515924 131 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 SNORA72.7-201ENST00000516349 94 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 AC021269.2-201ENST00000532318 330 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 MIR4744-201ENST00000581563 82 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 AL670379.2-201ENST00000604983 252 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 MTND5P35-201ENST00000557537 1720 ntBASIC3.09□□□□□ -1.91
VPS11Q9H270 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VPS11Q9H270 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS11Q9H270 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS11Q9H270 RNA5SP267-201ENST00000364893 126 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 Y_RNA.329-201ENST00000365209 107 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 RNU6-460P-201ENST00000391158 108 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 SNORA26.5-201ENST00000391215 123 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 U6atac.2-201ENST00000408644 118 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 RNU2-54P-201ENST00000410299 190 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 AC009963.1-201ENST00000417265 157 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS11Q9H270 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS11Q9H270 RPL23AP70-201ENST00000483361 460 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 RN7SL20P-201ENST00000488827 297 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 RN7SL633P-201ENST00000488974 297 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
VPS11Q9H270 AC107027.2-201ENST00000512197 115 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 RN7SKP164-201ENST00000516138 266 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.08□□□□□ -1.92
VPS11Q9H270 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS11Q9H270 MIR3199-1-201ENST00000582434 88 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 AL356157.2-201ENST00000605122 111 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 MIR6075-201ENST00000620782 95 ntBASIC3.08□□□□□ -1.92
VPS11Q9H270 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
VPS11Q9H270 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS11Q9H270 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS11Q9H270 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
VPS11Q9H270 SNORA71.3-201ENST00000362582 128 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 RNU6-1285P-201ENST00000363480 105 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 RNU1-33P-201ENST00000364249 162 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 RNU6-755P-201ENST00000364400 103 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 RNU6-142P-201ENST00000384019 107 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 RNU1-57P-201ENST00000384491 166 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 MIR544A-201ENST00000384855 91 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 RNU6-1064P-201ENST00000410626 104 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS11Q9H270 YME1L1P1-201ENST00000429435 297 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 GPM6BP3-201ENST00000442797 145 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 RPL39P29-201ENST00000447779 157 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 AC008155.2-201ENST00000464337 397 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 SNRPGP7-201ENST00000469016 106 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 AC091179.3-201ENST00000474761 144 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 RNU6-453P-201ENST00000516819 85 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 AC109810.1-201ENST00000534066 224 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 HSPE1P4-201ENST00000550617 308 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS11Q9H270 AL138963.2-201ENST00000605137 226 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 AC005520.5-201ENST00000613926 164 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 MTND5P32-201ENST00000560711 1802 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 AC108206.1-201ENST00000570186 4159 ntBASIC3.07□□□□□ -1.92
VPS11Q9H270 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS11Q9H270 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS11Q9H270 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS11Q9H270 RNU6-1048P-201ENST00000364054 107 ntBASIC3.06□□□□□ -1.92
VPS11Q9H270 RNU6-1180P-201ENST00000364935 107 ntBASIC3.06□□□□□ -1.92
VPS11Q9H270 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS11Q9H270 CYCSP48-201ENST00000417124 323 ntBASIC3.06□□□□□ -1.92
VPS11Q9H270 RPL30P4-201ENST00000429309 333 ntBASIC3.06□□□□□ -1.92
VPS11Q9H270 UBBP3-201ENST00000445497 241 ntBASIC3.06□□□□□ -1.92
VPS11Q9H270 EEF1B2P7-201ENST00000451177 676 ntBASIC3.06□□□□□ -1.92
VPS11Q9H270 snoU13.14-201ENST00000459372 104 ntBASIC3.06□□□□□ -1.92
VPS11Q9H270 AC080013.2-201ENST00000460866 323 ntBASIC3.06□□□□□ -1.92
VPS11Q9H270 RNU6-436P-201ENST00000516171 114 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms