Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC069294.1-201ENST00000608397 350 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 PCGEM1.1-201ENST00000613431 131 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 AC005562.2-201ENST00000618264 111 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF38Q9H0F5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
RNF38Q9H0F5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
RNF38Q9H0F5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF38Q9H0F5 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF38Q9H0F5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RNF38Q9H0F5 Y_RNA.81-201ENST00000362997 102 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 SNORA68.1-201ENST00000364537 132 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 RNU6-275P-201ENST00000364910 107 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 Y_RNA.572-201ENST00000384757 98 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 MIR569-201ENST00000385228 96 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 RNU6-257P-201ENST00000410238 98 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 RNA5SP201-201ENST00000410316 124 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 RN7SKP220-201ENST00000410611 288 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 CYCSP48-201ENST00000417124 323 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 AC097463.2-201ENST00000421074 142 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF38Q9H0F5 RNA5SP385-201ENST00000515947 110 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 SCARNA13-201ENST00000516672 275 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 AC021269.2-201ENST00000532318 330 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 EIF4BP1-201ENST00000554881 351 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 MIR5006-201ENST00000583027 110 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 SNORD11B-201ENST00000607707 90 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF38Q9H0F5 AC092435.3-201ENST00000565538 3654 ntBASIC3.24□□□□□ -1.89
RNF38Q9H0F5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.24□□□□□ -1.89
RNF38Q9H0F5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF38Q9H0F5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF38Q9H0F5 RNU4-15P-201ENST00000362613 141 ntBASIC3.23□□□□□ -1.89
RNF38Q9H0F5 SNORD115-30-201ENST00000364117 82 ntBASIC3.23□□□□□ -1.89
RNF38Q9H0F5 SNORD67-201ENST00000390833 111 ntBASIC3.23□□□□□ -1.89
RNF38Q9H0F5 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF38Q9H0F5 AC091179.1-201ENST00000461606 579 ntBASIC3.23□□□□□ -1.89
RNF38Q9H0F5 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.23□□□□□ -1.89
RNF38Q9H0F5 AC145146.1-201ENST00000496370 254 ntBASIC3.23□□□□□ -1.89
RNF38Q9H0F5 AC005840.1-201ENST00000498412 377 ntBASIC3.23□□□□□ -1.89
RNF38Q9H0F5 RNA5SP112-201ENST00000515937 99 ntBASIC3.23□□□□□ -1.89
RNF38Q9H0F5 AC027176.1-201ENST00000560204 514 ntBASIC3.23□□□□□ -1.89
RNF38Q9H0F5 MIR3684-201ENST00000579779 74 ntBASIC3.23□□□□□ -1.89
RNF38Q9H0F5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF38Q9H0F5 AC010329.5-201ENST00000623497 2174 ntBASIC3.23□□□□□ -1.89
RNF38Q9H0F5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
RNF38Q9H0F5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RNF38Q9H0F5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF38Q9H0F5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RNF38Q9H0F5 Y_RNA.111-201ENST00000363248 100 ntBASIC3.22□□□□□ -1.89
RNF38Q9H0F5 snoU2_19.4-201ENST00000364329 80 ntBASIC3.22□□□□□ -1.89
RNF38Q9H0F5 SNORA20-201ENST00000384662 132 ntBASIC3.22□□□□□ -1.89
RNF38Q9H0F5 RNU6-1168P-201ENST00000390831 104 ntBASIC3.22□□□□□ -1.89
RNF38Q9H0F5 RNU6-239P-201ENST00000390990 99 ntBASIC3.22□□□□□ -1.89
RNF38Q9H0F5 RNA5SP504-201ENST00000410676 117 ntBASIC3.22□□□□□ -1.89
RNF38Q9H0F5 RPL23AP70-201ENST00000483361 460 ntBASIC3.22□□□□□ -1.89
RNF38Q9H0F5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.22□□□□□ -1.89
RNF38Q9H0F5 SNORA25.12-201ENST00000516202 82 ntBASIC3.22□□□□□ -1.89
RNF38Q9H0F5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.22□□□□□ -1.89
RNF38Q9H0F5 AL033523.1-201ENST00000605153 153 ntBASIC3.22□□□□□ -1.89
RNF38Q9H0F5 AC013791.1-201ENST00000616619 62 ntBASIC3.22□□□□□ -1.89
RNF38Q9H0F5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.22□□□□□ -1.89
RNF38Q9H0F5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF38Q9H0F5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF38Q9H0F5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RNF38Q9H0F5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF38Q9H0F5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
RNF38Q9H0F5 RNU6-486P-201ENST00000363116 107 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 SNORA71.1-201ENST00000364523 117 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 Y_RNA.287-201ENST00000364853 94 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 RNU4-11P-201ENST00000365287 132 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 RNU6-578P-201ENST00000390980 103 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 RNU6-855P-201ENST00000410395 104 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.21□□□□□ -1.9
RNF38Q9H0F5 RN7SKP164-201ENST00000516138 266 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.21□□□□□ -1.9
RNF38Q9H0F5 AC136628.3-201ENST00000521868 290 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 EIF4A1P12-201ENST00000551910 141 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.21□□□□□ -1.9
RNF38Q9H0F5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.21□□□□□ -1.9
RNF38Q9H0F5 MIR548X2-201ENST00000579776 100 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 LARP7P3-201ENST00000579888 337 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 MIR4744-201ENST00000581563 82 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 MIR4506-201ENST00000584693 77 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 TCL6_2.1-201ENST00000615162 119 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 AC006386.2-201ENST00000624491 75 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 AC012005.1-201ENST00000624575 75 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 MIR3658-201ENST00000636291 56 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 AC068205.3-201ENST00000636385 468 ntBASIC3.21□□□□□ -1.9
RNF38Q9H0F5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF38Q9H0F5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RNF38Q9H0F5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.2□□□□□ -1.9
RNF38Q9H0F5 FAM35CP-201ENST00000554755 2470 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF38Q9H0F5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF38Q9H0F5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF38Q9H0F5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF38Q9H0F5 MIR22-201ENST00000362190 85 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 Y_RNA.24-201ENST00000362508 103 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms