Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 MTCO3P8-201ENST00000453691 755 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 AC105758.1-201ENST00000506038 399 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 AC067942.3-201ENST00000512025 362 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 RNU6-1114P-201ENST00000516022 107 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 RNU6-948P-201ENST00000516374 107 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 UBL5P4-201ENST00000562584 236 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 AC090617.3-201ENST00000573670 475 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.22□□□□□ -2.05
USP44Q9H0E7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.22□□□□□ -2.05
USP44Q9H0E7 AL080274.1-201ENST00000605565 220 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 AC025754.2-201ENST00000606491 432 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 SNORD11B-201ENST00000607707 90 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 AC022202.1-201ENST00000613515 211 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 AC084768.2-201ENST00000622736 221 ntBASIC2.22□□□□□ -2.05
USP44Q9H0E7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.21□□□□□ -2.06
USP44Q9H0E7 Y_RNA.364-201ENST00000365532 101 ntBASIC2.21□□□□□ -2.06
USP44Q9H0E7 SNORD42.2-201ENST00000365570 69 ntBASIC2.21□□□□□ -2.06
USP44Q9H0E7 AC004866.1-201ENST00000411748 78 ntBASIC2.21□□□□□ -2.06
USP44Q9H0E7 RPS20P15-201ENST00000412792 311 ntBASIC2.21□□□□□ -2.06
USP44Q9H0E7 HMGN2P19-201ENST00000425149 265 ntBASIC2.21□□□□□ -2.06
USP44Q9H0E7 MTND4P28-201ENST00000426217 387 ntBASIC2.21□□□□□ -2.06
USP44Q9H0E7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.21□□□□□ -2.06
USP44Q9H0E7 MTND5P16-201ENST00000460269 1703 ntBASIC2.21□□□□□ -2.06
USP44Q9H0E7 RNU6-237P-201ENST00000515985 71 ntBASIC2.21□□□□□ -2.06
USP44Q9H0E7 SNORA25.14-201ENST00000516481 132 ntBASIC2.21□□□□□ -2.06
USP44Q9H0E7 RRN3P3-201ENST00000549207 578 ntBASIC2.21□□□□□ -2.06
USP44Q9H0E7 AC015712.3-201ENST00000559380 164 ntBASIC2.21□□□□□ -2.06
USP44Q9H0E7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.21□□□□□ -2.06
USP44Q9H0E7 MIR8081-201ENST00000611533 95 ntBASIC2.21□□□□□ -2.06
USP44Q9H0E7 AC008873.1-201ENST00000625051 138 ntBASIC2.21□□□□□ -2.06
USP44Q9H0E7 MIR369-201ENST00000362155 70 ntBASIC2.2□□□□□ -2.06
USP44Q9H0E7 Y_RNA.5-201ENST00000362334 102 ntBASIC2.2□□□□□ -2.06
USP44Q9H0E7 RNA5SP432-201ENST00000362480 116 ntBASIC2.2□□□□□ -2.06
USP44Q9H0E7 Y_RNA.197-201ENST00000364004 102 ntBASIC2.2□□□□□ -2.06
USP44Q9H0E7 SNORD48-201ENST00000364953 64 ntBASIC2.2□□□□□ -2.06
USP44Q9H0E7 MIR10B-201ENST00000385011 110 ntBASIC2.2□□□□□ -2.06
USP44Q9H0E7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
USP44Q9H0E7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
USP44Q9H0E7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.2□□□□□ -2.06
USP44Q9H0E7 USP9YP16-201ENST00000430287 407 ntBASIC2.2□□□□□ -2.06
USP44Q9H0E7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.2□□□□□ -2.06
USP44Q9H0E7 USP9YP23-201ENST00000455085 407 ntBASIC2.2□□□□□ -2.06
USP44Q9H0E7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.2□□□□□ -2.06
USP44Q9H0E7 RNU6-1170P-201ENST00000515974 106 ntBASIC2.2□□□□□ -2.06
USP44Q9H0E7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.2□□□□□ -2.06
USP44Q9H0E7 MIR4255-201ENST00000579351 72 ntBASIC2.2□□□□□ -2.06
USP44Q9H0E7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.2□□□□□ -2.06
USP44Q9H0E7 AC087588.2-201ENST00000617667 426 ntBASIC2.2□□□□□ -2.06
USP44Q9H0E7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.2□□□□□ -2.06
USP44Q9H0E7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.19□□□□□ -2.06
USP44Q9H0E7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USP44Q9H0E7 Y_RNA.813-201ENST00000364639 102 ntBASIC2.19□□□□□ -2.06
USP44Q9H0E7 RNU6-793P-201ENST00000384233 104 ntBASIC2.19□□□□□ -2.06
USP44Q9H0E7 Y_RNA.496-201ENST00000384444 101 ntBASIC2.19□□□□□ -2.06
USP44Q9H0E7 RNU6-1235P-201ENST00000384559 107 ntBASIC2.19□□□□□ -2.06
USP44Q9H0E7 RNA5SP213-201ENST00000391031 106 ntBASIC2.19□□□□□ -2.06
USP44Q9H0E7 MTCO1P44-201ENST00000441935 243 ntBASIC2.19□□□□□ -2.06
USP44Q9H0E7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.19□□□□□ -2.06
USP44Q9H0E7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.19□□□□□ -2.06
USP44Q9H0E7 Y_RNA.639-201ENST00000458981 102 ntBASIC2.19□□□□□ -2.06
USP44Q9H0E7 U8.22-201ENST00000459141 133 ntBASIC2.19□□□□□ -2.06
USP44Q9H0E7 RNU7-87P-201ENST00000459343 62 ntBASIC2.19□□□□□ -2.06
USP44Q9H0E7 RNU6-498P-201ENST00000459468 107 ntBASIC2.19□□□□□ -2.06
USP44Q9H0E7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.19□□□□□ -2.06
USP44Q9H0E7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.19□□□□□ -2.06
USP44Q9H0E7 MIR3683-201ENST00000580847 82 ntBASIC2.19□□□□□ -2.06
USP44Q9H0E7 AC005786.1-201ENST00000588553 154 ntBASIC2.19□□□□□ -2.06
USP44Q9H0E7 AC091925.1-201ENST00000623204 462 ntBASIC2.19□□□□□ -2.06
USP44Q9H0E7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.19□□□□□ -2.06
USP44Q9H0E7 RNU6-23P-201ENST00000363283 107 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 RNU6-873P-201ENST00000363833 107 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 Y_RNA.179-201ENST00000363844 90 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 RNY3P11-201ENST00000364153 102 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 Y_RNA.358-201ENST00000365491 99 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 Y_RNA.395-201ENST00000383945 109 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 Y_RNA.557-201ENST00000384680 107 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 RNU11-3P-201ENST00000391111 133 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 AL627390.1-201ENST00000396055 340 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 MIR1283-2-201ENST00000408621 87 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 RNU7-4P-201ENST00000516961 62 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.18□□□□□ -2.06
USP44Q9H0E7 AC090971.5-201ENST00000621102 293 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 uc_338.22-201ENST00000622722 187 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 AC068205.3-201ENST00000636385 468 ntBASIC2.18□□□□□ -2.06
USP44Q9H0E7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.17□□□□□ -2.06
USP44Q9H0E7 Y_RNA.11-201ENST00000362375 109 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 RNA5SP493-201ENST00000364115 91 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 Y_RNA.314-201ENST00000365114 102 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 RNU6-975P-201ENST00000384296 105 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 MIR625-201ENST00000385047 85 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
USP44Q9H0E7 AL512604.1-201ENST00000404812 257 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 U3.40-201ENST00000408706 208 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 RNA5SP450-201ENST00000411206 102 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.17□□□□□ -2.06
USP44Q9H0E7 AC018865.2-201ENST00000423631 129 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 EIF1P2-201ENST00000428233 350 ntBASIC2.17□□□□□ -2.06
USP44Q9H0E7 AL353689.1-201ENST00000438895 199 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms