Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-3Q9BYR4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-3Q9BYR4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-3Q9BYR4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-3Q9BYR4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-3Q9BYR4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-3Q9BYR4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
KRTAP4-3Q9BYR4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-3Q9BYR4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-3Q9BYR4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-3Q9BYR4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 AC005261.2-201ENST00000593427 4258 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 AC096644.4-201ENST00000563417 2912 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 RNA5SP22-201ENST00000365393 109 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 SNORA70.4-201ENST00000365509 134 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR513A2-201ENST00000385249 127 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 SNORA26.3-201ENST00000391119 136 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 SNORA75.1-201ENST00000391130 148 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 RNA5SP354-201ENST00000391247 136 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 AC004866.1-201ENST00000411748 78 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 POLR2J4-204ENST00000418424 324 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 HLA-N-201ENST00000437516 135 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 RPS26P56-201ENST00000444468 240 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU7-27P-201ENST00000459281 62 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 AC010401.1-201ENST00000463867 348 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 YPEL5P3-201ENST00000547227 352 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR4778-201ENST00000577635 80 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 AC087499.8-201ENST00000578406 226 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 AC078899.2-201ENST00000595282 212 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 AL512598.1-201ENST00000610158 273 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 AC140113.4-201ENST00000622087 222 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 AC022893.2-201ENST00000564832 3296 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 AC087190.4-201ENST00000574616 8334 ntBASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-3Q9BYR4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 LINC01355-201ENST00000566551 5444 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 AC092435.4-201ENST00000623012 4159 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RNY4P19-201ENST00000362530 96 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 SNORA27.1-201ENST00000362604 124 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU6-485P-201ENST00000363475 107 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU6-1141P-201ENST00000364520 107 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 SNORA16B-201ENST00000364674 135 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU1-140P-201ENST00000365040 165 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 CD24P4-201ENST00000382840 243 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU6-317P-201ENST00000384031 107 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU6-72P-201ENST00000384285 79 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU6-166P-201ENST00000384371 107 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 SNORA2B-201ENST00000384583 137 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 SNORD90-201ENST00000391145 111 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 PTMAP2-201ENST00000397627 327 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 HDGFP1-201ENST00000405943 252 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR548T-201ENST00000408369 74 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR1179-201ENST00000408703 91 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 AC063976.3-201ENST00000426849 329 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 AL121890.1-201ENST00000435457 205 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms