Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM56Q9BRZ2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 RNU6-215P-201ENST00000365169 102 ntBASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 RNU6-80P-201ENST00000384195 107 ntBASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 RNU1-101P-201ENST00000391171 127 ntBASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 AC126124.2-201ENST00000413542 321 ntBASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 RPS27P1-201ENST00000450552 247 ntBASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 RNU2-27P-201ENST00000516185 142 ntBASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 RNU7-115P-201ENST00000516433 55 ntBASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 RNU6-1098P-201ENST00000516772 96 ntBASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 MIR2276-201ENST00000516886 89 ntBASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 MIR4753-201ENST00000585119 83 ntBASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 MIR6844-201ENST00000637122 62 ntBASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TRIM56Q9BRZ2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 Y_RNA.521-201ENST00000384560 114 ntBASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 Y_RNA.542-201ENST00000384641 111 ntBASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 MT-TT-201ENST00000387460 66 ntBASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 SNORA36B-201ENST00000410438 131 ntBASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 AC110768.1-201ENST00000509222 400 ntBASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 AC019176.2-201ENST00000611579 315 ntBASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 AL049781.1-201ENST00000623195 3585 ntBASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM56Q9BRZ2 U8.7-201ENST00000364940 136 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 MIR1283-1-201ENST00000408494 87 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 RNU4-43P-201ENST00000410628 137 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 AL035423.1-201ENST00000420331 213 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 RNU7-197P-201ENST00000458836 62 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 AC117454.1-201ENST00000491120 168 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 RNU7-116P-201ENST00000516940 62 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 SCARNA3-201ENST00000517097 143 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 RNU6-586P-201ENST00000517265 104 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 AP003357.1-201ENST00000604497 148 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 AC007179.3-201ENST00000604976 235 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 AC011603.4-201ENST00000611325 277 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 U6.98-201ENST00000637157 84 ntBASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM56Q9BRZ2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
TRIM56Q9BRZ2 Y_RNA.124-201ENST00000363339 93 ntBASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-234P-201ENST00000365229 104 ntBASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 Y_RNA.393-201ENST00000383936 102 ntBASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 SNORA79-201ENST00000408376 140 ntBASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 AL121890.1-201ENST00000435457 205 ntBASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 RNU7-57P-201ENST00000459540 60 ntBASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 AC010401.1-201ENST00000463867 348 ntBASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 RN7SL594P-201ENST00000470590 287 ntBASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 RPL36AP21-201ENST00000490372 323 ntBASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-1337P-201ENST00000516525 95 ntBASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-919P-201ENST00000516731 104 ntBASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 AC002064.3-201ENST00000623448 346 ntBASIC3.52□□□□□ -1.85
TRIM56Q9BRZ2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-834P-201ENST00000362367 110 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 SNORA27.1-201ENST00000362604 124 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 CD24P4-201ENST00000382840 243 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-1323P-201ENST00000384025 107 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 SNORA20B-201ENST00000384220 132 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 AL139095.1-201ENST00000404326 391 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-383P-201ENST00000410864 94 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 RPS12P18-201ENST00000442381 270 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 RNU7-170P-201ENST00000459303 61 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 RNU7-14P-201ENST00000459331 62 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 AC080013.2-201ENST00000460866 323 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 RPS26P55-201ENST00000471178 356 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 RAC1P5-201ENST00000512182 576 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 RNU6-1234P-201ENST00000516877 103 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 MIR3186-201ENST00000577404 85 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 AP001340.1-201ENST00000624405 217 ntBASIC3.51□□□□□ -1.85
TRIM56Q9BRZ2 snoZ196.1-201ENST00000625269 89 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms