Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL353997.1-201ENST00000432936 108 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 AL591806.2-201ENST00000433122 173 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 HMGN2P34-201ENST00000437647 269 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 RPL23AP63-201ENST00000498752 471 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 HMGN1P13-201ENST00000505795 138 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 RNU6-1114P-201ENST00000516022 107 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 RNU6-295P-201ENST00000516901 104 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.57□□□□□ -2.16
SSX3Q99909 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.57□□□□□ -2.16
SSX3Q99909 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.57□□□□□ -2.16
SSX3Q99909 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.57□□□□□ -2.16
SSX3Q99909 AL121579.1-201ENST00000555129 305 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 AC024614.2-201ENST00000577584 372 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 MIR5089-201ENST00000580047 84 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.57□□□□□ -2.16
SSX3Q99909 AC010999.1-201ENST00000611856 324 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 AC010615.1-201ENST00000594254 1764 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 ZNF355P-201ENST00000427301 3216 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.56□□□□□ -2.16
SSX3Q99909 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
SSX3Q99909 RNU6-222P-201ENST00000362438 107 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 Y_RNA.106-201ENST00000363189 100 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 U3.8-201ENST00000363675 217 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 RNU6-414P-201ENST00000363705 104 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 RNU6-296P-201ENST00000384608 107 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 MIR548B-201ENST00000385247 97 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 SNORA40.18-201ENST00000391200 128 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 SNORA75.4-201ENST00000391278 119 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 MIR190B-201ENST00000401119 79 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.56□□□□□ -2.16
SSX3Q99909 PDCL2P1-201ENST00000419302 352 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 AC008134.1-201ENST00000420943 193 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.56□□□□□ -2.16
SSX3Q99909 AC245047.4-201ENST00000433189 144 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 RPL23AP50-201ENST00000434149 455 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 AC112492.4-201ENST00000456549 352 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 snoU13.9-201ENST00000458927 103 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.56□□□□□ -2.16
SSX3Q99909 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.56□□□□□ -2.16
SSX3Q99909 AC116353.2-201ENST00000505332 712 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 PRDX4P1-201ENST00000507189 574 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 AC093303.1-201ENST00000514549 295 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 RNA5SP182-201ENST00000516064 82 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 RNU6-307P-201ENST00000516743 106 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SSX3Q99909 AC084364.2-201ENST00000546924 395 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.56□□□□□ -2.16
SSX3Q99909 MIR5701-3-201ENST00000578890 82 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 AC005899.2-201ENST00000584353 90 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 MIR5701-1-201ENST00000585138 82 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 MIR5701-2-201ENST00000615634 82 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 AC022306.2-201ENST00000617563 647 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 TPTEP1-208ENST00000636884 213 ntBASIC1.56□□□□□ -2.16
SSX3Q99909 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SSX3Q99909 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SSX3Q99909 MTND5P16-201ENST00000460269 1703 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 Y_RNA.404-201ENST00000383978 102 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 RNU6-417P-201ENST00000384712 107 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 RNU6-331P-201ENST00000384724 107 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 U8.13-201ENST00000390842 128 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 RNU1-139P-201ENST00000391307 165 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.55□□□□□ -2.16
SSX3Q99909 MTCYBP10-201ENST00000424905 650 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.55□□□□□ -2.16
SSX3Q99909 NDUFB4P10-201ENST00000452541 359 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.55□□□□□ -2.16
SSX3Q99909 snoU13.23-201ENST00000458863 104 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 RNU6-221P-201ENST00000459541 99 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 AC108210.2-201ENST00000503681 201 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.55□□□□□ -2.16
SSX3Q99909 Y_RNA.691-201ENST00000516611 103 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 RNU6-548P-201ENST00000517083 115 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 AC025647.1-201ENST00000517879 253 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 AC110588.1-201ENST00000559699 137 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 SNRPGP19-201ENST00000603826 189 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 MZT1P2-201ENST00000604387 248 ntBASIC1.55□□□□□ -2.16
SSX3Q99909 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.55□□□□□ -2.16
SSX3Q99909 Y_RNA.67-201ENST00000362870 100 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 SNORA72.2-201ENST00000365028 127 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 SNORD81.2-201ENST00000365153 76 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 RNU6-1240P-201ENST00000365155 104 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 RNU6-281P-201ENST00000384212 103 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 MIR1267-201ENST00000408723 78 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 AC069257.2-201ENST00000441819 155 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.54□□□□□ -2.16
SSX3Q99909 HSPE1P24-201ENST00000450782 238 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 Y_RNA.635-201ENST00000459041 101 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 RNU7-87P-201ENST00000459343 62 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 MTND4P17-201ENST00000470444 350 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 RPL36AP21-201ENST00000490372 323 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 Y_RNA.683-201ENST00000516508 93 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 SCARNA16.2-201ENST00000516520 172 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 AC105029.1-201ENST00000520250 669 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.54□□□□□ -2.16
SSX3Q99909 AC093023.1-201ENST00000547375 507 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 AC015712.3-201ENST00000559380 164 ntBASIC1.54□□□□□ -2.16
SSX3Q99909 AP001485.1-201ENST00000604799 199 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms