Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AL357139.1-201ENST00000407792 426 ntBASIC-0.71□□□□□ -2.52
COL12A1Q99715 AC068533.2-201ENST00000411872 306 ntBASIC-0.71□□□□□ -2.52
COL12A1Q99715 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.71□□□□□ -2.52
COL12A1Q99715 AC069271.1-201ENST00000445577 156 ntBASIC-0.71□□□□□ -2.52
COL12A1Q99715 MIR18B-201ENST00000454574 71 ntBASIC-0.71□□□□□ -2.52
COL12A1Q99715 DEFB131D-201ENST00000526803 184 ntBASIC-0.71□□□□□ -2.52
COL12A1Q99715 DEFB131C-201ENST00000528817 165 ntBASIC-0.71□□□□□ -2.52
COL12A1Q99715 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.71□□□□□ -2.52
COL12A1Q99715 SCARNA4-201ENST00000629045 128 ntBASIC-0.71□□□□□ -2.52
COL12A1Q99715 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.72□□□□□ -2.52
COL12A1Q99715 SNORA72.1-201ENST00000363485 129 ntBASIC-0.72□□□□□ -2.52
COL12A1Q99715 RNU6-702P-201ENST00000364982 107 ntBASIC-0.72□□□□□ -2.52
COL12A1Q99715 MIR1827-201ENST00000408549 66 ntBASIC-0.72□□□□□ -2.52
COL12A1Q99715 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.72□□□□□ -2.52
COL12A1Q99715 AC022483.1-201ENST00000514020 567 ntBASIC-0.72□□□□□ -2.52
COL12A1Q99715 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.72□□□□□ -2.52
COL12A1Q99715 MIR6079-201ENST00000635807 62 ntBASIC-0.72□□□□□ -2.52
COL12A1Q99715 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.72□□□□□ -2.52
COL12A1Q99715 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.72□□□□□ -2.52
COL12A1Q99715 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.72□□□□□ -2.52
COL12A1Q99715 SNORD111-201ENST00000408139 94 ntBASIC-0.72□□□□□ -2.52
COL12A1Q99715 AL158053.1-201ENST00000441503 453 ntBASIC-0.72□□□□□ -2.52
COL12A1Q99715 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.72□□□□□ -2.52
COL12A1Q99715 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-0.72□□□□□ -2.52
COL12A1Q99715 RNU4-83P-201ENST00000410863 133 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 USP9YP22-201ENST00000438971 294 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 AL031667.1-201ENST00000440222 725 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 AP000533.3-201ENST00000447704 118 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 SUMO2P18-201ENST00000518873 252 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 HIGD1AP6-201ENST00000521833 279 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 MIR3925-201ENST00000584674 77 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 AC079416.3-201ENST00000624479 549 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 RNU4-21P-201ENST00000362802 126 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 SNORA2.1-201ENST00000363089 137 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 SNORD56B-201ENST00000384713 71 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 MIR653-201ENST00000385279 96 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 TXNL1P1-201ENST00000429528 554 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-0.73□□□□□ -2.53
COL12A1Q99715 AC105417.1-201ENST00000514691 285 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.73□□□□□ -2.53
COL12A1Q99715 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.73□□□□□ -2.53
COL12A1Q99715 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.73□□□□□ -2.53
COL12A1Q99715 AC007014.2-201ENST00000615581 479 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 SEC63P2-201ENST00000503863 1939 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 RNU6-98P-201ENST00000384173 107 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 RNA5SP86-201ENST00000390869 98 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 RNU6-333P-201ENST00000459117 107 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 MIR1273C-201ENST00000578669 77 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 MIR3152-201ENST00000579801 74 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 AC064872.1-201ENST00000604823 1072 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 AL451064.1-201ENST00000607718 471 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 AL442067.1-201ENST00000613261 223 ntBASIC-0.73□□□□□ -2.53
COL12A1Q99715 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.73□□□□□ -2.53
COL12A1Q99715 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.73□□□□□ -2.53
COL12A1Q99715 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.74□□□□□ -2.53
COL12A1Q99715 RNU6-862P-201ENST00000362804 105 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 SNORA4.2-201ENST00000365313 147 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 SNORA2B-201ENST00000384583 137 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.74□□□□□ -2.53
COL12A1Q99715 AC244505.6-201ENST00000452829 130 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.74□□□□□ -2.53
COL12A1Q99715 SNORD22.1-201ENST00000516331 125 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 MIR3136-201ENST00000583498 78 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-0.74□□□□□ -2.53
COL12A1Q99715 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 RNY3P9-201ENST00000384727 106 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.74□□□□□ -2.53
COL12A1Q99715 RNU7-134P-201ENST00000458997 64 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.74□□□□□ -2.53
COL12A1Q99715 RPL39P34-201ENST00000477141 156 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 SNORD38.3-201ENST00000516599 73 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 RNU6-678P-201ENST00000516832 109 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 AC107952.2-201ENST00000606048 486 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 AL159972.1-201ENST00000625150 448 ntBASIC-0.74□□□□□ -2.53
COL12A1Q99715 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.75□□□□□ -2.53
COL12A1Q99715 MTCO3P29-201ENST00000432119 779 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.75□□□□□ -2.53
COL12A1Q99715 RNA5SP290-201ENST00000517133 127 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 AC127455.1-201ENST00000565496 145 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.75□□□□□ -2.53
COL12A1Q99715 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.75□□□□□ -2.53
COL12A1Q99715 AC004223.2-201ENST00000590309 544 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 MIR655-201ENST00000362159 97 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 MTATP6P30-201ENST00000443540 664 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.75□□□□□ -2.53
COL12A1Q99715 MTCO3P27-201ENST00000514397 196 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 RNU6-504P-201ENST00000516568 104 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 HMGB1P51-201ENST00000605166 638 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms