Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MIR586-201ENST00000385035 97 ntBASIC1.06□□□□□ -2.24
USP47Q96K76 TIMM9P3-201ENST00000428659 274 ntBASIC1.06□□□□□ -2.24
USP47Q96K76 TOMM22P2-201ENST00000430735 237 ntBASIC1.06□□□□□ -2.24
USP47Q96K76 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.06□□□□□ -2.24
USP47Q96K76 MTND1P35-201ENST00000526739 508 ntBASIC1.06□□□□□ -2.24
USP47Q96K76 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.06□□□□□ -2.24
USP47Q96K76 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.06□□□□□ -2.24
USP47Q96K76 MIR3664-201ENST00000579074 99 ntBASIC1.06□□□□□ -2.24
USP47Q96K76 AL590095.2-201ENST00000604136 117 ntBASIC1.06□□□□□ -2.24
USP47Q96K76 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.06□□□□□ -2.24
USP47Q96K76 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.06□□□□□ -2.24
USP47Q96K76 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.06□□□□□ -2.24
USP47Q96K76 Z69908.1-201ENST00000622603 247 ntBASIC1.06□□□□□ -2.24
USP47Q96K76 AC099654.5-201ENST00000636479 350 ntBASIC1.06□□□□□ -2.24
USP47Q96K76 ZNF204P-201ENST00000416749 2397 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 Y_RNA.409-201ENST00000383990 98 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 MIR515-2-201ENST00000384883 83 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 MIR515-1-201ENST00000384884 83 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
USP47Q96K76 RNU4-55P-201ENST00000410731 137 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 AC010154.1-201ENST00000425857 269 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.05□□□□□ -2.24
USP47Q96K76 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.05□□□□□ -2.24
USP47Q96K76 MTCO1P19-201ENST00000443487 500 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.05□□□□□ -2.24
USP47Q96K76 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.05□□□□□ -2.24
USP47Q96K76 AC092989.1-201ENST00000481235 277 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 RPL23AP75-201ENST00000491601 451 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 SNORA19.2-201ENST00000516013 114 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 RNU6-1332P-201ENST00000516666 104 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 RN7SKP88-201ENST00000516847 250 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.05□□□□□ -2.24
USP47Q96K76 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.05□□□□□ -2.24
USP47Q96K76 TPRKBP2-201ENST00000565969 475 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 CPDP1-201ENST00000579660 283 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 AC008088.1-201ENST00000580993 280 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 AL929325.1-201ENST00000603096 117 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 AL360085.1-201ENST00000604713 532 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 AC017083.3-201ENST00000609955 700 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 MIR8076-201ENST00000611401 83 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 7SK.8-201ENST00000612110 250 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 7SK.11-201ENST00000615477 250 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 7SK.13-201ENST00000622040 250 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 AC078883.4-201ENST00000623218 367 ntBASIC1.05□□□□□ -2.24
USP47Q96K76 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
USP47Q96K76 SNORA67.2-201ENST00000384300 149 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
USP47Q96K76 MIR450B-201ENST00000401182 78 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 AL356776.1-201ENST00000406574 447 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 MIR320B2-201ENST00000408479 138 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 HMGN1P33-201ENST00000432945 451 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 RNU6-261P-201ENST00000459506 102 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 AC103851.1-201ENST00000506833 274 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 AC024995.1-201ENST00000523014 93 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 AC104383.1-201ENST00000530297 370 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 AC007834.2-201ENST00000536310 343 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.04□□□□□ -2.24
USP47Q96K76 AC013244.2-201ENST00000603396 103 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 AC092807.2-201ENST00000609367 243 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 AL078596.1-201ENST00000624856 447 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 SCARNA4-201ENST00000629045 128 ntBASIC1.04□□□□□ -2.24
USP47Q96K76 Y_RNA.251-201ENST00000364551 99 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 RNU4-20P-201ENST00000365601 151 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 SNORA69-201ENST00000383895 132 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 RNU6-784P-201ENST00000384330 106 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 Y_RNA.553-201ENST00000384670 102 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 MIR936-201ENST00000401264 98 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 MTCO2P16-201ENST00000436962 677 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 MTND3P16-201ENST00000452205 344 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 Y_RNA.654-201ENST00000497848 106 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 AC091885.1-201ENST00000506658 268 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 RNU7-40P-201ENST00000516397 64 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 RNU1-142P-201ENST00000516682 145 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 OSBPL9P5-201ENST00000542581 171 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 AC006362.1-201ENST00000567392 174 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 AC137590.2-201ENST00000619709 240 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 snoZ196.1-201ENST00000625269 89 ntBASIC1.03□□□□□ -2.24
USP47Q96K76 RNU6-1123P-201ENST00000362347 106 ntBASIC1.02□□□□□ -2.25
USP47Q96K76 Y_RNA.359-201ENST00000365498 102 ntBASIC1.02□□□□□ -2.25
USP47Q96K76 RNU6-933P-201ENST00000384424 107 ntBASIC1.02□□□□□ -2.25
USP47Q96K76 AL606517.2-201ENST00000442855 241 ntBASIC1.02□□□□□ -2.25
USP47Q96K76 MTCO1P29-201ENST00000496868 288 ntBASIC1.02□□□□□ -2.25
USP47Q96K76 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.02□□□□□ -2.25
USP47Q96K76 RNU1-117P-201ENST00000517041 158 ntBASIC1.02□□□□□ -2.25
USP47Q96K76 AC025647.1-201ENST00000517879 253 ntBASIC1.02□□□□□ -2.25
USP47Q96K76 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.02□□□□□ -2.25
USP47Q96K76 AL512605.2-201ENST00000592972 256 ntBASIC1.02□□□□□ -2.25
USP47Q96K76 AP001330.5-201ENST00000607176 411 ntBASIC1.02□□□□□ -2.25
USP47Q96K76 AC021506.2-201ENST00000612354 169 ntBASIC1.02□□□□□ -2.25
USP47Q96K76 AP000770.2-201ENST00000623694 100 ntBASIC1.02□□□□□ -2.25
USP47Q96K76 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.02□□□□□ -2.25
USP47Q96K76 SNORD114-23-201ENST00000363536 72 ntBASIC1.01□□□□□ -2.25
USP47Q96K76 RNU6-1240P-201ENST00000365155 104 ntBASIC1.01□□□□□ -2.25
USP47Q96K76 SNORD116-8-201ENST00000384365 95 ntBASIC1.01□□□□□ -2.25
USP47Q96K76 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
USP47Q96K76 Y_RNA.582-201ENST00000391023 95 ntBASIC1.01□□□□□ -2.25
USP47Q96K76 EIF4E2P1-201ENST00000393781 255 ntBASIC1.01□□□□□ -2.25
USP47Q96K76 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 795.2 ms