Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.1□□□□□ -1.91
RTF1Q92541 AC005357.1-201ENST00000588399 301 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 AC005176.2-201ENST00000596933 147 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.1□□□□□ -1.91
RTF1Q92541 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTF1Q92541 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTF1Q92541 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RTF1Q92541 SNORD32B-201ENST00000364460 84 ntBASIC3.09□□□□□ -1.91
RTF1Q92541 U6atac.2-201ENST00000408644 118 ntBASIC3.09□□□□□ -1.91
RTF1Q92541 ELOCP21-201ENST00000412558 336 ntBASIC3.09□□□□□ -1.91
RTF1Q92541 AL135786.1-201ENST00000415892 214 ntBASIC3.09□□□□□ -1.91
RTF1Q92541 RPS12P2-201ENST00000439728 269 ntBASIC3.09□□□□□ -1.91
RTF1Q92541 RNU6-625P-201ENST00000459412 107 ntBASIC3.09□□□□□ -1.91
RTF1Q92541 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.09□□□□□ -1.91
RTF1Q92541 DEFB108E-201ENST00000524692 240 ntBASIC3.09□□□□□ -1.91
RTF1Q92541 DEFB131C-201ENST00000528817 165 ntBASIC3.09□□□□□ -1.91
RTF1Q92541 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.09□□□□□ -1.91
RTF1Q92541 SNORD11B-201ENST00000607707 90 ntBASIC3.09□□□□□ -1.91
RTF1Q92541 MIR7515-201ENST00000637837 67 ntBASIC3.09□□□□□ -1.91
RTF1Q92541 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
RTF1Q92541 MIR410-201ENST00000362222 80 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 Y_RNA.257-201ENST00000364596 102 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 SNORA20.1-201ENST00000364790 130 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 SNORA18.2-201ENST00000383865 132 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 Y_RNA.416-201ENST00000384014 113 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 Y_RNA.498-201ENST00000384460 102 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 RNU6-102P-201ENST00000384485 104 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 Y_RNA.552-201ENST00000384665 112 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 RNU6-21P-201ENST00000384710 107 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RTF1Q92541 RNU6-907P-201ENST00000390924 102 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RTF1Q92541 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RTF1Q92541 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 RNU6-1328P-201ENST00000410938 106 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 AL513477.1-202ENST00000417061 214 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 MTND4LP30-201ENST00000454092 297 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 RNU2-44P-201ENST00000516795 194 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 RNU7-110P-201ENST00000516891 62 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 SCARNA3-201ENST00000517097 143 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 HSPE1P18-201ENST00000517602 280 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.08□□□□□ -1.92
RTF1Q92541 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.08□□□□□ -1.92
RTF1Q92541 MIR5006-201ENST00000583027 110 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 AC067747.1-201ENST00000608026 250 ntBASIC3.08□□□□□ -1.92
RTF1Q92541 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
RTF1Q92541 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTF1Q92541 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.08□□□□□ -1.92
RTF1Q92541 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
RTF1Q92541 Y_RNA.20-201ENST00000362479 113 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 Y_RNA.60-201ENST00000362831 98 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 RNU1-72P-201ENST00000362976 153 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 U8.2-201ENST00000363156 134 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 SNORA25.6-201ENST00000364121 118 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 RNU6-1175P-201ENST00000365200 107 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 Y_RNA.352-201ENST00000365439 102 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 RNU6-1310P-201ENST00000384153 107 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 RNA5SP425-201ENST00000410336 112 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 AC004866.1-201ENST00000411748 78 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 HMGN2P35-201ENST00000412164 270 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 AC007064.1-201ENST00000412238 351 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 RAB28P5-201ENST00000427490 651 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.07□□□□□ -1.92
RTF1Q92541 RPL30P4-201ENST00000429309 333 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 AC140059.1-201ENST00000489238 361 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.07□□□□□ -1.92
RTF1Q92541 MIR3670-2-201ENST00000582974 65 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 MIR3670-1-201ENST00000584160 65 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 MIR3670-3-201ENST00000584855 65 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.07□□□□□ -1.92
RTF1Q92541 MIR3670-4-201ENST00000612260 65 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 AC141273.2-201ENST00000618989 130 ntBASIC3.07□□□□□ -1.92
RTF1Q92541 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
RTF1Q92541 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RTF1Q92541 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RTF1Q92541 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RTF1Q92541 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RTF1Q92541 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RTF1Q92541 Y_RNA.16-201ENST00000362421 102 ntBASIC3.06□□□□□ -1.92
RTF1Q92541 RNU6-727P-201ENST00000363592 107 ntBASIC3.06□□□□□ -1.92
RTF1Q92541 SNORA12-201ENST00000391162 147 ntBASIC3.06□□□□□ -1.92
RTF1Q92541 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RTF1Q92541 AL033519.2-201ENST00000403958 392 ntBASIC3.06□□□□□ -1.92
RTF1Q92541 RN7SKP284-201ENST00000411002 343 ntBASIC3.06□□□□□ -1.92
RTF1Q92541 RPL23AP36-201ENST00000413895 458 ntBASIC3.06□□□□□ -1.92
RTF1Q92541 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.06□□□□□ -1.92
RTF1Q92541 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.06□□□□□ -1.92
RTF1Q92541 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.06□□□□□ -1.92
RTF1Q92541 AC107222.1-201ENST00000510899 637 ntBASIC3.06□□□□□ -1.92
RTF1Q92541 SERF1AP1-201ENST00000514575 187 ntBASIC3.06□□□□□ -1.92
RTF1Q92541 RNU1-41P-201ENST00000516161 162 ntBASIC3.06□□□□□ -1.92
RTF1Q92541 RNU1-48P-201ENST00000516400 162 ntBASIC3.06□□□□□ -1.92
RTF1Q92541 AC022441.3-201ENST00000605737 136 ntBASIC3.06□□□□□ -1.92
RTF1Q92541 AC068205.3-201ENST00000636385 468 ntBASIC3.06□□□□□ -1.92
RTF1Q92541 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.06□□□□□ -1.92
RTF1Q92541 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RTF1Q92541 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTF1Q92541 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTF1Q92541 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms