Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 MLLT10P1-201ENST00000418346 262 ntBASIC5.84□□□□□ -1.47
TRIM41Q8WV44 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM41Q8WV44 AC078817.1-201ENST00000492623 435 ntBASIC5.84□□□□□ -1.47
TRIM41Q8WV44 AL356274.2-201ENST00000624379 3752 ntBASIC5.84□□□□□ -1.47
TRIM41Q8WV44 AC138915.1-201ENST00000565427 1685 ntBASIC5.84□□□□□ -1.47
TRIM41Q8WV44 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
TRIM41Q8WV44 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM41Q8WV44 SNORD114-19-201ENST00000363072 75 ntBASIC5.83□□□□□ -1.48
TRIM41Q8WV44 Y_RNA.114-201ENST00000363265 113 ntBASIC5.83□□□□□ -1.48
TRIM41Q8WV44 Y_RNA.361-201ENST00000365515 120 ntBASIC5.83□□□□□ -1.48
TRIM41Q8WV44 AIMP1P2-201ENST00000425294 312 ntBASIC5.83□□□□□ -1.48
TRIM41Q8WV44 AC108210.2-201ENST00000503681 201 ntBASIC5.83□□□□□ -1.48
TRIM41Q8WV44 MIR2114-201ENST00000516645 80 ntBASIC5.83□□□□□ -1.48
TRIM41Q8WV44 AL110115.1-201ENST00000614396 364 ntBASIC5.83□□□□□ -1.48
TRIM41Q8WV44 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM41Q8WV44 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM41Q8WV44 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM41Q8WV44 MFSD8-233ENST00000641482 4860 ntBASIC5.83□□□□□ -1.48
TRIM41Q8WV44 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM41Q8WV44 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TRIM41Q8WV44 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM41Q8WV44 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM41Q8WV44 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM41Q8WV44 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM41Q8WV44 RNA5SP502-201ENST00000362694 119 ntBASIC5.82□□□□□ -1.48
TRIM41Q8WV44 snoU13.28-201ENST00000459235 104 ntBASIC5.82□□□□□ -1.48
TRIM41Q8WV44 RPL23AP54-201ENST00000495129 419 ntBASIC5.82□□□□□ -1.48
TRIM41Q8WV44 AC091826.1-201ENST00000514065 313 ntBASIC5.82□□□□□ -1.48
TRIM41Q8WV44 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM41Q8WV44 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM41Q8WV44 HOTTIP_4.1-201ENST00000618195 165 ntBASIC5.82□□□□□ -1.48
TRIM41Q8WV44 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM41Q8WV44 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM41Q8WV44 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TRIM41Q8WV44 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
TRIM41Q8WV44 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM41Q8WV44 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM41Q8WV44 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM41Q8WV44 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM41Q8WV44 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM41Q8WV44 MIR450A1-201ENST00000362262 91 ntBASIC5.81□□□□□ -1.48
TRIM41Q8WV44 MIR147B-201ENST00000390185 80 ntBASIC5.81□□□□□ -1.48
TRIM41Q8WV44 RN7SKP111-201ENST00000410349 271 ntBASIC5.81□□□□□ -1.48
TRIM41Q8WV44 RNU6-1337P-201ENST00000516525 95 ntBASIC5.81□□□□□ -1.48
TRIM41Q8WV44 Y_RNA.694-201ENST00000516677 117 ntBASIC5.81□□□□□ -1.48
TRIM41Q8WV44 NDUFA5P6-201ENST00000542110 379 ntBASIC5.81□□□□□ -1.48
TRIM41Q8WV44 POLR3GP1-201ENST00000594073 261 ntBASIC5.81□□□□□ -1.48
TRIM41Q8WV44 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM41Q8WV44 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TRIM41Q8WV44 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM41Q8WV44 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM41Q8WV44 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM41Q8WV44 snoU2_19.1-201ENST00000362361 80 ntBASIC5.8□□□□□ -1.48
TRIM41Q8WV44 RNA5SP189-201ENST00000364920 115 ntBASIC5.8□□□□□ -1.48
TRIM41Q8WV44 Y_RNA.355-201ENST00000365462 98 ntBASIC5.8□□□□□ -1.48
TRIM41Q8WV44 SNORA67.2-201ENST00000384300 149 ntBASIC5.8□□□□□ -1.48
TRIM41Q8WV44 SNORD116-13-201ENST00000384408 92 ntBASIC5.8□□□□□ -1.48
TRIM41Q8WV44 RNU6-748P-201ENST00000384648 107 ntBASIC5.8□□□□□ -1.48
TRIM41Q8WV44 AC009414.1-201ENST00000427200 443 ntBASIC5.8□□□□□ -1.48
TRIM41Q8WV44 MTCO1P44-201ENST00000441935 243 ntBASIC5.8□□□□□ -1.48
TRIM41Q8WV44 RNA5SP310-201ENST00000459084 116 ntBASIC5.8□□□□□ -1.48
TRIM41Q8WV44 RPL23AP62-201ENST00000463396 453 ntBASIC5.8□□□□□ -1.48
TRIM41Q8WV44 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM41Q8WV44 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM41Q8WV44 AC091152.3-201ENST00000604227 325 ntBASIC5.8□□□□□ -1.48
TRIM41Q8WV44 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM41Q8WV44 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM41Q8WV44 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM41Q8WV44 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM41Q8WV44 RNU4-41P-201ENST00000364426 143 ntBASIC5.79□□□□□ -1.48
TRIM41Q8WV44 SNORD18B-201ENST00000365659 72 ntBASIC5.79□□□□□ -1.48
TRIM41Q8WV44 Y_RNA.495-201ENST00000384435 112 ntBASIC5.79□□□□□ -1.48
TRIM41Q8WV44 MIR7-2-201ENST00000384970 110 ntBASIC5.79□□□□□ -1.48
TRIM41Q8WV44 SNORA12-201ENST00000391162 147 ntBASIC5.79□□□□□ -1.48
TRIM41Q8WV44 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM41Q8WV44 Y_RNA.651-201ENST00000459380 103 ntBASIC5.79□□□□□ -1.48
TRIM41Q8WV44 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM41Q8WV44 RNU6-537P-201ENST00000517277 103 ntBASIC5.79□□□□□ -1.48
TRIM41Q8WV44 AC022149.2-201ENST00000621061 203 ntBASIC5.79□□□□□ -1.48
TRIM41Q8WV44 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM41Q8WV44 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM41Q8WV44 RNU6-1010P-201ENST00000362757 107 ntBASIC5.78□□□□□ -1.48
TRIM41Q8WV44 AC007256.1-201ENST00000392253 2765 ntBASIC5.78□□□□□ -1.48
TRIM41Q8WV44 RNY4P30-201ENST00000410216 95 ntBASIC5.78□□□□□ -1.48
TRIM41Q8WV44 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM41Q8WV44 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM41Q8WV44 MIR4319-201ENST00000577285 85 ntBASIC5.78□□□□□ -1.48
TRIM41Q8WV44 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM41Q8WV44 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.78□□□□□ -1.48
TRIM41Q8WV44 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM41Q8WV44 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM41Q8WV44 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM41Q8WV44 Y_RNA.120-201ENST00000363304 110 ntBASIC5.77□□□□□ -1.49
TRIM41Q8WV44 AP002088.1-201ENST00000382740 395 ntBASIC5.77□□□□□ -1.49
TRIM41Q8WV44 Y_RNA.432-201ENST00000384087 111 ntBASIC5.77□□□□□ -1.49
TRIM41Q8WV44 SNORA20B-201ENST00000384220 132 ntBASIC5.77□□□□□ -1.49
TRIM41Q8WV44 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TRIM41Q8WV44 RNU2-49P-201ENST00000410666 184 ntBASIC5.77□□□□□ -1.49
TRIM41Q8WV44 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM41Q8WV44 AC108938.1-201ENST00000451204 136 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms