Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 Y_RNA.262-201ENST00000364641 102 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 Y_RNA.308-201ENST00000365043 101 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 RNU6-975P-201ENST00000384296 105 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 MIR490-201ENST00000384865 128 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 SNORA26.5-201ENST00000391215 123 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 FO393413.1-201ENST00000402892 195 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 MTND2P29-201ENST00000438595 412 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 AC016925.1-201ENST00000458303 298 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 U8.19-201ENST00000459095 133 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 AC023141.11-201ENST00000508864 202 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 AC136628.3-201ENST00000521868 290 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 AC087441.2-201ENST00000529141 262 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.9□□□□□ -1.95
HIPK4Q8NE63 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.9□□□□□ -1.95
HIPK4Q8NE63 MIR4753-201ENST00000585119 83 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 AL078604.3-201ENST00000615580 211 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 MIR5739-201ENST00000619803 80 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 MIR6075-201ENST00000620782 95 ntBASIC2.9□□□□□ -1.95
HIPK4Q8NE63 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.95
HIPK4Q8NE63 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HIPK4Q8NE63 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.9□□□□□ -1.95
HIPK4Q8NE63 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HIPK4Q8NE63 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HIPK4Q8NE63 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.9□□□□□ -1.95
HIPK4Q8NE63 RNU1-23P-201ENST00000363361 144 ntBASIC2.89□□□□□ -1.95
HIPK4Q8NE63 Y_RNA.368-201ENST00000365547 113 ntBASIC2.89□□□□□ -1.95
HIPK4Q8NE63 RNU6-493P-201ENST00000391321 108 ntBASIC2.89□□□□□ -1.95
HIPK4Q8NE63 SNORD88.1-201ENST00000408684 91 ntBASIC2.89□□□□□ -1.95
HIPK4Q8NE63 RNU6-710P-201ENST00000410424 105 ntBASIC2.89□□□□□ -1.95
HIPK4Q8NE63 AL451074.5-201ENST00000415894 435 ntBASIC2.89□□□□□ -1.95
HIPK4Q8NE63 AC074198.2-201ENST00000508153 258 ntBASIC2.89□□□□□ -1.95
HIPK4Q8NE63 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.89□□□□□ -1.95
HIPK4Q8NE63 MIR5692C2-201ENST00000577959 77 ntBASIC2.89□□□□□ -1.95
HIPK4Q8NE63 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.89□□□□□ -1.95
HIPK4Q8NE63 snoZ196.1-201ENST00000625269 89 ntBASIC2.89□□□□□ -1.95
HIPK4Q8NE63 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HIPK4Q8NE63 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HIPK4Q8NE63 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.88□□□□□ -1.95
HIPK4Q8NE63 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HIPK4Q8NE63 AC068700.1-201ENST00000565862 3754 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 Y_RNA.233-201ENST00000364407 101 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 RNA5SP72-201ENST00000364442 117 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 Y_RNA.435-201ENST00000384095 112 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 Y_RNA.464-201ENST00000384282 110 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 SNORD14D-201ENST00000384390 87 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 MIR181A2-201ENST00000384863 110 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 SNORD67-201ENST00000390833 111 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 AL355796.1-201ENST00000406706 323 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 RN7SKP51-201ENST00000410781 304 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 RNU2-32P-201ENST00000411193 191 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 AL161788.1-201ENST00000441805 169 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 AC016717.1-201ENST00000448918 286 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 RNU6-221P-201ENST00000459541 99 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 AC114982.1-201ENST00000469402 321 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 HMGB3P3-201ENST00000510526 400 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.88□□□□□ -1.95
HIPK4Q8NE63 AC022616.8-201ENST00000533569 253 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 MIR92B-201ENST00000607575 96 ntBASIC2.88□□□□□ -1.95
HIPK4Q8NE63 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HIPK4Q8NE63 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
HIPK4Q8NE63 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HIPK4Q8NE63 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HIPK4Q8NE63 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HIPK4Q8NE63 Y_RNA.124-201ENST00000363339 93 ntBASIC2.87□□□□□ -1.95
HIPK4Q8NE63 RNU6-1180P-201ENST00000364935 107 ntBASIC2.87□□□□□ -1.95
HIPK4Q8NE63 Y_RNA.310-201ENST00000365063 113 ntBASIC2.87□□□□□ -1.95
HIPK4Q8NE63 RNU6-546P-201ENST00000383991 107 ntBASIC2.87□□□□□ -1.95
HIPK4Q8NE63 SNORA72.4-201ENST00000384174 132 ntBASIC2.87□□□□□ -1.95
HIPK4Q8NE63 SNORD15B-201ENST00000384714 146 ntBASIC2.87□□□□□ -1.95
HIPK4Q8NE63 RNU6-220P-201ENST00000390919 107 ntBASIC2.87□□□□□ -1.95
HIPK4Q8NE63 AL590004.2-201ENST00000404787 371 ntBASIC2.87□□□□□ -1.95
HIPK4Q8NE63 AC008155.2-201ENST00000464337 397 ntBASIC2.87□□□□□ -1.95
HIPK4Q8NE63 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.87□□□□□ -1.95
HIPK4Q8NE63 RNU6-1212P-201ENST00000517023 104 ntBASIC2.87□□□□□ -1.95
HIPK4Q8NE63 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.87□□□□□ -1.95
HIPK4Q8NE63 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.87□□□□□ -1.95
HIPK4Q8NE63 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.87□□□□□ -1.95
HIPK4Q8NE63 MIR3684-201ENST00000579779 74 ntBASIC2.87□□□□□ -1.95
HIPK4Q8NE63 AC007318.2-201ENST00000620999 243 ntBASIC2.87□□□□□ -1.95
HIPK4Q8NE63 U6.105-201ENST00000637379 88 ntBASIC2.87□□□□□ -1.95
HIPK4Q8NE63 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.87□□□□□ -1.95
HIPK4Q8NE63 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.86□□□□□ -1.95
HIPK4Q8NE63 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.86□□□□□ -1.95
HIPK4Q8NE63 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.86□□□□□ -1.95
HIPK4Q8NE63 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.86□□□□□ -1.95
HIPK4Q8NE63 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.86□□□□□ -1.95
HIPK4Q8NE63 RNU6-1048P-201ENST00000364054 107 ntBASIC2.86□□□□□ -1.95
HIPK4Q8NE63 MIR183-201ENST00000384958 110 ntBASIC2.86□□□□□ -1.95
HIPK4Q8NE63 MIR627-201ENST00000384979 97 ntBASIC2.86□□□□□ -1.95
HIPK4Q8NE63 SNORA48.5-201ENST00000391143 135 ntBASIC2.86□□□□□ -1.95
HIPK4Q8NE63 RNU6-855P-201ENST00000410395 104 ntBASIC2.86□□□□□ -1.95
HIPK4Q8NE63 RNU6-57P-201ENST00000411348 103 ntBASIC2.86□□□□□ -1.95
HIPK4Q8NE63 RPS29P6-201ENST00000438196 145 ntBASIC2.86□□□□□ -1.95
HIPK4Q8NE63 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.86□□□□□ -1.95
HIPK4Q8NE63 AC074290.1-201ENST00000448883 135 ntBASIC2.86□□□□□ -1.95
HIPK4Q8NE63 HMGN2P18-201ENST00000450680 270 ntBASIC2.86□□□□□ -1.95
HIPK4Q8NE63 RPS27AP9-201ENST00000477681 438 ntBASIC2.86□□□□□ -1.95
HIPK4Q8NE63 AC109925.1-201ENST00000478069 331 ntBASIC2.86□□□□□ -1.95
HIPK4Q8NE63 SNORA48.11-201ENST00000517015 89 ntBASIC2.86□□□□□ -1.95
HIPK4Q8NE63 SUMO2P18-201ENST00000518873 252 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms