Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.5□□□□□ -2.01
PNLDC1Q8NA58 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.5□□□□□ -2.01
PNLDC1Q8NA58 AL713866.2-201ENST00000603579 219 ntBASIC2.5□□□□□ -2.01
PNLDC1Q8NA58 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.5□□□□□ -2.01
PNLDC1Q8NA58 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.5□□□□□ -2.01
PNLDC1Q8NA58 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PNLDC1Q8NA58 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 RNU6-486P-201ENST00000363116 107 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 RNU6-944P-201ENST00000364023 107 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 SNORD115-30-201ENST00000364117 82 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 RNU1-109P-201ENST00000383960 147 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 RNU6-886P-201ENST00000384319 105 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 RNU6-1274P-201ENST00000384557 107 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 MIR548B-201ENST00000385247 97 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 NDUFB4P4-201ENST00000404822 243 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 U3.40-201ENST00000408706 208 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 Y_RNA.590-201ENST00000410140 107 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 Y_RNA.597-201ENST00000410463 100 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 RNA5SP475-201ENST00000410568 110 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 RPL30P4-201ENST00000429309 333 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 UBBP3-201ENST00000445497 241 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 RNU7-120P-201ENST00000459334 63 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 Y_RNA.638-201ENST00000459374 113 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 AC107393.1-201ENST00000512403 346 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 RNU6-1098P-201ENST00000516772 96 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 AC008739.2-201ENST00000597006 317 ntBASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PNLDC1Q8NA58 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 Y_RNA.243-201ENST00000364481 109 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 Y_RNA.329-201ENST00000365209 107 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 Y_RNA.361-201ENST00000365515 120 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 RNU6-47P-201ENST00000383866 107 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 MIR29B2-201ENST00000385055 81 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 AL135790.2-201ENST00000437701 267 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 SUMO1P2-201ENST00000452524 304 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 NDUFB4P10-201ENST00000452541 359 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 AC140059.1-201ENST00000489238 361 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 RNU6-107P-201ENST00000516643 102 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 AC024405.2-202ENST00000532731 184 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 AC004486.1-201ENST00000546846 233 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 RPL17P51-201ENST00000605218 238 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 AC005828.6-201ENST00000606610 232 ntBASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PNLDC1Q8NA58 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 U3.8-201ENST00000363675 217 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 SNORD56.5-201ENST00000364281 72 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 SNORA68.1-201ENST00000364537 132 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 MIR181A2-201ENST00000384863 110 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 Y_RNA.793-201ENST00000411222 111 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 HMGN2P35-201ENST00000412164 270 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 Z96811.1-201ENST00000445880 108 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 MIR449C-201ENST00000516047 92 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 MIR3670-2-201ENST00000582974 65 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 MIR3605-201ENST00000583214 100 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 MIR3670-1-201ENST00000584160 65 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 MIR3670-3-201ENST00000584855 65 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 AL512605.2-201ENST00000592972 256 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 MIR3670-4-201ENST00000612260 65 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 snoU18.1-201ENST00000629629 71 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 MIR7515-201ENST00000637837 67 ntBASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PNLDC1Q8NA58 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 MIR26A1-201ENST00000362205 77 ntBASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 RNU6-682P-201ENST00000363843 106 ntBASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 RNA5SP139-201ENST00000364340 117 ntBASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 SNORA54-201ENST00000384281 123 ntBASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 MIR586-201ENST00000385035 97 ntBASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 TOMM22P2-201ENST00000430735 237 ntBASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 HMGN2P9-201ENST00000476875 229 ntBASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 RPS29P26-201ENST00000477483 171 ntBASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 RN7SL297P-201ENST00000483161 293 ntBASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 SCGB1D5P-201ENST00000515134 247 ntBASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 Y_RNA.679-201ENST00000516416 91 ntBASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 RN7SKP40-201ENST00000517211 242 ntBASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PNLDC1Q8NA58 Z83818.1-201ENST00000603584 150 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms