Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RNU6-63P-201ENST00000516690 95 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 RNU6-965P-201ENST00000516721 96 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 AC025647.1-201ENST00000517879 253 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 AC018630.3-201ENST00000542637 96 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.85□□□□□ -1.79
SIX5Q8N196 AL031274.2-201ENST00000599419 203 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.85□□□□□ -1.79
SIX5Q8N196 MIR6852-201ENST00000621699 66 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SIX5Q8N196 AC002064.3-201ENST00000623448 346 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SIX5Q8N196 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX5Q8N196 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SIX5Q8N196 ZNF702P-202ENST00000434269 1966 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX5Q8N196 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX5Q8N196 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX5Q8N196 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX5Q8N196 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIX5Q8N196 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX5Q8N196 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIX5Q8N196 GABRG2-229ENST00000641017 3628 ntBASIC3.84□□□□□ -1.79
SIX5Q8N196 SNORD45.3-201ENST00000363836 72 ntBASIC3.84□□□□□ -1.79
SIX5Q8N196 Y_RNA.273-201ENST00000364703 102 ntBASIC3.84□□□□□ -1.79
SIX5Q8N196 Y_RNA.587-201ENST00000391210 103 ntBASIC3.84□□□□□ -1.79
SIX5Q8N196 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.84□□□□□ -1.79
SIX5Q8N196 RPL30P4-201ENST00000429309 333 ntBASIC3.84□□□□□ -1.79
SIX5Q8N196 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX5Q8N196 RPS27P22-201ENST00000478056 241 ntBASIC3.84□□□□□ -1.79
SIX5Q8N196 RAC1P2-201ENST00000511164 579 ntBASIC3.84□□□□□ -1.79
SIX5Q8N196 AC107934.2-201ENST00000518653 310 ntBASIC3.84□□□□□ -1.79
SIX5Q8N196 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX5Q8N196 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX5Q8N196 MIR3199-1-201ENST00000582434 88 ntBASIC3.84□□□□□ -1.79
SIX5Q8N196 AC107294.3-201ENST00000609211 526 ntBASIC3.84□□□□□ -1.79
SIX5Q8N196 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX5Q8N196 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX5Q8N196 MAPK10-322ENST00000641485 4530 ntBASIC3.84□□□□□ -1.8
SIX5Q8N196 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SIX5Q8N196 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SIX5Q8N196 RNU6-1180P-201ENST00000364935 107 ntBASIC3.83□□□□□ -1.8
SIX5Q8N196 RNU6-1240P-201ENST00000365155 104 ntBASIC3.83□□□□□ -1.8
SIX5Q8N196 Y_RNA.500-201ENST00000384466 111 ntBASIC3.83□□□□□ -1.8
SIX5Q8N196 SNORA75.5-201ENST00000391291 81 ntBASIC3.83□□□□□ -1.8
SIX5Q8N196 CYCSP4-201ENST00000429682 331 ntBASIC3.83□□□□□ -1.8
SIX5Q8N196 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.83□□□□□ -1.8
SIX5Q8N196 RNU2-34P-201ENST00000516534 121 ntBASIC3.83□□□□□ -1.8
SIX5Q8N196 RNU6-1234P-201ENST00000516877 103 ntBASIC3.83□□□□□ -1.8
SIX5Q8N196 RNA5SP490-201ENST00000517141 136 ntBASIC3.83□□□□□ -1.8
SIX5Q8N196 AC090142.3-201ENST00000519012 385 ntBASIC3.83□□□□□ -1.8
SIX5Q8N196 AP001328.1-201ENST00000528550 176 ntBASIC3.83□□□□□ -1.8
SIX5Q8N196 MIR5047-201ENST00000579212 100 ntBASIC3.83□□□□□ -1.8
SIX5Q8N196 AC105245.1-201ENST00000581934 244 ntBASIC3.83□□□□□ -1.8
SIX5Q8N196 AL591424.2-201ENST00000617023 128 ntBASIC3.83□□□□□ -1.8
SIX5Q8N196 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIX5Q8N196 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX5Q8N196 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX5Q8N196 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX5Q8N196 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX5Q8N196 RNU1-72P-201ENST00000362976 153 ntBASIC3.82□□□□□ -1.8
SIX5Q8N196 RNU1-33P-201ENST00000364249 162 ntBASIC3.82□□□□□ -1.8
SIX5Q8N196 RNU6-460P-201ENST00000391158 108 ntBASIC3.82□□□□□ -1.8
SIX5Q8N196 AC126124.2-201ENST00000413542 321 ntBASIC3.82□□□□□ -1.8
SIX5Q8N196 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX5Q8N196 AC005326.1-201ENST00000429197 123 ntBASIC3.82□□□□□ -1.8
SIX5Q8N196 ARF4P2-201ENST00000430209 526 ntBASIC3.82□□□□□ -1.8
SIX5Q8N196 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX5Q8N196 RNU7-197P-201ENST00000458836 62 ntBASIC3.82□□□□□ -1.8
SIX5Q8N196 RPL27AP5-201ENST00000469428 449 ntBASIC3.82□□□□□ -1.8
SIX5Q8N196 SCARNA3-201ENST00000517097 143 ntBASIC3.82□□□□□ -1.8
SIX5Q8N196 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.82□□□□□ -1.8
SIX5Q8N196 MIR3124-201ENST00000582636 67 ntBASIC3.82□□□□□ -1.8
SIX5Q8N196 MIR8057-201ENST00000620957 69 ntBASIC3.82□□□□□ -1.8
SIX5Q8N196 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX5Q8N196 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIX5Q8N196 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX5Q8N196 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX5Q8N196 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SIX5Q8N196 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIX5Q8N196 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIX5Q8N196 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SIX5Q8N196 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX5Q8N196 SNORD9-201ENST00000362566 104 ntBASIC3.81□□□□□ -1.8
SIX5Q8N196 RNU6-674P-201ENST00000363831 107 ntBASIC3.81□□□□□ -1.8
SIX5Q8N196 CD24P4-201ENST00000382840 243 ntBASIC3.81□□□□□ -1.8
SIX5Q8N196 RNU6-80P-201ENST00000384195 107 ntBASIC3.81□□□□□ -1.8
SIX5Q8N196 RNU6-588P-201ENST00000410281 105 ntBASIC3.81□□□□□ -1.8
SIX5Q8N196 RN7SKP101-201ENST00000411376 320 ntBASIC3.81□□□□□ -1.8
SIX5Q8N196 DBIP2-201ENST00000419076 262 ntBASIC3.81□□□□□ -1.8
SIX5Q8N196 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX5Q8N196 AC023449.1-201ENST00000454464 154 ntBASIC3.81□□□□□ -1.8
SIX5Q8N196 AC092991.1-201ENST00000477176 376 ntBASIC3.81□□□□□ -1.8
SIX5Q8N196 RNU2-56P-201ENST00000516826 190 ntBASIC3.81□□□□□ -1.8
SIX5Q8N196 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX5Q8N196 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.81□□□□□ -1.8
SIX5Q8N196 MIR5739-201ENST00000619803 80 ntBASIC3.81□□□□□ -1.8
SIX5Q8N196 MIR7515-201ENST00000637837 67 ntBASIC3.81□□□□□ -1.8
SIX5Q8N196 CENPCP1-201ENST00000533085 2578 ntBASIC3.8□□□□□ -1.8
SIX5Q8N196 RNU6-546P-201ENST00000383991 107 ntBASIC3.8□□□□□ -1.8
SIX5Q8N196 U6atac.2-201ENST00000408644 118 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms