Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 RNU6-239P-201ENST00000390990 99 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 U3.40-201ENST00000408706 208 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 RNA5SP39-201ENST00000411245 120 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 CR769767.1-201ENST00000436337 346 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 AC008267.6-201ENST00000441664 139 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 RPS20P10-201ENST00000451209 253 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 RNU7-57P-201ENST00000459540 60 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 S100A11P2-201ENST00000467589 312 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 RNU2-34P-201ENST00000516534 121 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 AC026333.2-201ENST00000542164 106 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 AC090616.3-201ENST00000582184 217 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 AL162274.2-201ENST00000614406 332 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 snoZ196.1-201ENST00000625269 89 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 AC010332.2-201ENST00000613083 1904 ntBASIC3.64□□□□□ -1.83
NPAS4Q8IUM7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 RNA5SP205-201ENST00000364653 136 ntBASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 RNU6-275P-201ENST00000364910 107 ntBASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 MIR1185-2-201ENST00000408687 86 ntBASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 AC016925.1-201ENST00000458303 298 ntBASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 RNU6-948P-201ENST00000516374 107 ntBASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 RNU6-971P-201ENST00000516920 106 ntBASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 AC068700.1-201ENST00000565862 3754 ntBASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.63□□□□□ -1.83
NPAS4Q8IUM7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 AC068647.1-201ENST00000489539 2265 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 Y_RNA.218-201ENST00000364218 104 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 RNU6-454P-201ENST00000364292 107 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 Y_RNA.353-201ENST00000365440 108 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 RNU6-44P-201ENST00000384045 107 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 RNU6-975P-201ENST00000384296 105 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 SNORA20-201ENST00000384662 132 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 AC003685.2-201ENST00000422795 395 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 RNU6-436P-201ENST00000516171 114 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 SNORA25.12-201ENST00000516202 82 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 RNA5SP341-201ENST00000516261 117 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 AC100767.1-201ENST00000528178 123 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 AC009127.3-201ENST00000570531 403 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 AC020914.4-201ENST00000597690 277 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 MIR486-1-201ENST00000612171 68 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 FAM35CP-201ENST00000554755 2470 ntBASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
NPAS4Q8IUM7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 RNU1-18P-201ENST00000363062 164 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 RNU6-801P-201ENST00000364087 105 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 RNU4-10P-201ENST00000364383 140 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 RNU6-215P-201ENST00000365169 102 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 SNORA40-201ENST00000388090 126 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 RNU6-381P-201ENST00000391259 108 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 AC008134.1-201ENST00000420943 193 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 MTND4LP9-201ENST00000427694 174 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 AL135790.2-201ENST00000437701 267 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 AL445687.1-201ENST00000439946 251 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 AL137159.1-201ENST00000452808 512 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 ATP5EP1-201ENST00000510257 156 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 RNU7-121P-201ENST00000516604 62 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 EIF4BP1-201ENST00000554881 351 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.61□□□□□ -1.83
NPAS4Q8IUM7 AC093908.1-201ENST00000623125 8092 ntBASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 SNORD115-30-201ENST00000364117 82 ntBASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 Y_RNA.243-201ENST00000364481 109 ntBASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 RNU6-1180P-201ENST00000364935 107 ntBASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 RNU4-11P-201ENST00000365287 132 ntBASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 AL031003.1-201ENST00000404229 172 ntBASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 AL357552.1-201ENST00000445254 415 ntBASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 AC021269.2-201ENST00000532318 330 ntBASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 MIR3658-201ENST00000636291 56 ntBASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms