Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF180Q86T96 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF180Q86T96 MIR410-201ENST00000362222 80 ntBASIC2.95□□□□□ -1.94
RNF180Q86T96 RNU6-961P-201ENST00000363893 105 ntBASIC2.95□□□□□ -1.94
RNF180Q86T96 RNA5SP504-201ENST00000410676 117 ntBASIC2.95□□□□□ -1.94
RNF180Q86T96 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF180Q86T96 EDDM3CP-201ENST00000415977 425 ntBASIC2.95□□□□□ -1.94
RNF180Q86T96 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF180Q86T96 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF180Q86T96 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF180Q86T96 RNU7-57P-201ENST00000459540 60 ntBASIC2.95□□□□□ -1.94
RNF180Q86T96 AC018868.1-201ENST00000491307 315 ntBASIC2.95□□□□□ -1.94
RNF180Q86T96 AC093259.1-201ENST00000509755 300 ntBASIC2.95□□□□□ -1.94
RNF180Q86T96 AC004817.2-201ENST00000561794 651 ntBASIC2.95□□□□□ -1.94
RNF180Q86T96 MIR3126-201ENST00000577443 74 ntBASIC2.95□□□□□ -1.94
RNF180Q86T96 MIR3684-201ENST00000579779 74 ntBASIC2.95□□□□□ -1.94
RNF180Q86T96 MIR4524B-201ENST00000581569 115 ntBASIC2.95□□□□□ -1.94
RNF180Q86T96 AC006380.1-201ENST00000603598 186 ntBASIC2.95□□□□□ -1.94
RNF180Q86T96 AC011373.1-201ENST00000607270 237 ntBASIC2.95□□□□□ -1.94
RNF180Q86T96 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF180Q86T96 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
RNF180Q86T96 RNU1-91P-201ENST00000364746 163 ntBASIC2.94□□□□□ -1.94
RNF180Q86T96 Y_RNA.556-201ENST00000384677 113 ntBASIC2.94□□□□□ -1.94
RNF180Q86T96 RNU2-48P-201ENST00000410694 191 ntBASIC2.94□□□□□ -1.94
RNF180Q86T96 RPL23AP36-201ENST00000413895 458 ntBASIC2.94□□□□□ -1.94
RNF180Q86T96 AC123900.1-201ENST00000420390 96 ntBASIC2.94□□□□□ -1.94
RNF180Q86T96 AC096920.1-201ENST00000423991 241 ntBASIC2.94□□□□□ -1.94
RNF180Q86T96 PRELID3BP1-201ENST00000457142 540 ntBASIC2.94□□□□□ -1.94
RNF180Q86T96 snoU13.15-201ENST00000459407 104 ntBASIC2.94□□□□□ -1.94
RNF180Q86T96 RNU7-110P-201ENST00000516891 62 ntBASIC2.94□□□□□ -1.94
RNF180Q86T96 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF180Q86T96 AC025754.2-201ENST00000606491 432 ntBASIC2.94□□□□□ -1.94
RNF180Q86T96 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF180Q86T96 U4.3-201ENST00000621047 82 ntBASIC2.94□□□□□ -1.94
RNF180Q86T96 MIR8062-201ENST00000621515 85 ntBASIC2.94□□□□□ -1.94
RNF180Q86T96 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
RNF180Q86T96 AC108206.1-201ENST00000570186 4159 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 RNU6-1266P-201ENST00000362794 105 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 Y_RNA.99-201ENST00000363138 105 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 RNU6-975P-201ENST00000384296 105 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 RNU6-937P-201ENST00000384325 106 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 Y_RNA.512-201ENST00000384518 102 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 RPL21P3-201ENST00000395517 478 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF180Q86T96 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF180Q86T96 SEPT14P8-201ENST00000508026 178 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 AC025465.3-201ENST00000510570 311 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 SNORA4.4-201ENST00000515921 135 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 AP003733.2-201ENST00000529409 171 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RNF180Q86T96 MIR4300-201ENST00000581016 96 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 MIR3605-201ENST00000583214 100 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF180Q86T96 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 snoZ196.1-201ENST00000625269 89 ntBASIC2.93□□□□□ -1.94
RNF180Q86T96 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
RNF180Q86T96 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RNF180Q86T96 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF180Q86T96 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF180Q86T96 MAPK10-266ENST00000641066 6555 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.92□□□□□ -1.94
RNF180Q86T96 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RNF180Q86T96 Y_RNA.64-201ENST00000362845 102 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 Y_RNA.222-201ENST00000364264 102 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 RNU6-1175P-201ENST00000365200 107 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 Y_RNA.332-201ENST00000365271 113 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 RNU6-1235P-201ENST00000384559 107 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 RNU6-1072P-201ENST00000384703 107 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 RNU6-443P-201ENST00000384780 107 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 MIR27B-201ENST00000385129 97 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 MIR548B-201ENST00000385247 97 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 SNORD115-46-201ENST00000390982 71 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 RNA5SP425-201ENST00000410336 112 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 RNU4-53P-201ENST00000410828 140 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 AL135786.1-201ENST00000415892 214 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 LINC01399-202ENST00000458450 244 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 RNU6-498P-201ENST00000459468 107 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 RPS29P21-201ENST00000496272 170 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF180Q86T96 AL109918.3-201ENST00000603072 338 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 SNORD113-5-201ENST00000607261 78 ntBASIC2.92□□□□□ -1.94
RNF180Q86T96 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
RNF180Q86T96 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
RNF180Q86T96 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RNF180Q86T96 Y_RNA.26-201ENST00000362539 101 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 Y_RNA.193-201ENST00000363979 102 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 RNU6-702P-201ENST00000364982 107 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 RNU6-806P-201ENST00000365147 105 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 Y_RNA.570-201ENST00000384750 101 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 MIR1302-6-201ENST00000408466 90 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 Z98742.3-201ENST00000418637 326 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 AC008134.1-201ENST00000420943 193 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 AL357134.1-201ENST00000445848 426 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.91□□□□□ -1.94
RNF180Q86T96 RN7SL499P-201ENST00000481141 276 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 CYCSP26-201ENST00000534107 320 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 PRELID2P1-201ENST00000552837 301 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 MIR4423-201ENST00000580922 80 ntBASIC2.91□□□□□ -1.94
RNF180Q86T96 MIR4769-201ENST00000584126 77 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms