Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 RNU1-42P-201ENST00000364033 160 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 RNU6-1026P-201ENST00000384465 108 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 MIR10B-201ENST00000385011 110 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 RNU11-3P-201ENST00000391111 133 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 RNA5SP465-201ENST00000391195 109 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 MIR300-201ENST00000401138 83 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 MIR1323-201ENST00000408090 73 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 RNA5SP504-201ENST00000410676 117 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 MTND3P23-201ENST00000431980 347 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 RNU1-131P-201ENST00000458943 161 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 AC027575.1-201ENST00000481064 460 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 AC097473.1-201ENST00000508142 408 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 RNU6-120P-201ENST00000516077 103 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 RNU6-559P-201ENST00000516151 98 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 FRG2DP-202ENST00000566967 323 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.85□□□□□ -2.11
CTR9Q6PD62 AC022513.1-201ENST00000624512 117 ntBASIC1.85□□□□□ -2.11
CTR9Q6PD62 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CTR9Q6PD62 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CTR9Q6PD62 MIR126-201ENST00000362291 85 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 RNU6-222P-201ENST00000362438 107 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 Y_RNA.106-201ENST00000363189 100 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 Y_RNA.263-201ENST00000364659 114 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 SNORD116-29-201ENST00000384516 83 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 Y_RNA.529-201ENST00000384586 119 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 RNU6-541P-201ENST00000384709 110 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 RNU6-1009P-201ENST00000390996 107 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CTR9Q6PD62 BTF3P4-201ENST00000418852 495 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.84□□□□□ -2.11
CTR9Q6PD62 AC007395.1-201ENST00000451333 677 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 HMGN2P9-201ENST00000476875 229 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 RNU6-344P-201ENST00000516635 111 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 AP005660.1-201ENST00000522972 293 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 AC005899.2-201ENST00000584353 90 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 AC100812.1-201ENST00000607622 580 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 AC025253.1-201ENST00000613623 543 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 AC130454.1-201ENST00000622948 401 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 MIR1302-1-201ENST00000637932 143 ntBASIC1.84□□□□□ -2.11
CTR9Q6PD62 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.84□□□□□ -2.12
CTR9Q6PD62 RNU6-23P-201ENST00000363283 107 ntBASIC1.83□□□□□ -2.12
CTR9Q6PD62 RNU4-13P-201ENST00000364019 141 ntBASIC1.83□□□□□ -2.12
CTR9Q6PD62 Y_RNA.387-201ENST00000383918 102 ntBASIC1.83□□□□□ -2.12
CTR9Q6PD62 MIR190B-201ENST00000401119 79 ntBASIC1.83□□□□□ -2.12
CTR9Q6PD62 MTND2P29-201ENST00000438595 412 ntBASIC1.83□□□□□ -2.12
CTR9Q6PD62 MTCO3P10-201ENST00000455912 772 ntBASIC1.83□□□□□ -2.12
CTR9Q6PD62 SNORA25.14-201ENST00000516481 132 ntBASIC1.83□□□□□ -2.12
CTR9Q6PD62 Y_RNA.706-201ENST00000516933 99 ntBASIC1.83□□□□□ -2.12
CTR9Q6PD62 AL355375.2-201ENST00000574825 175 ntBASIC1.83□□□□□ -2.12
CTR9Q6PD62 SNORD53B-201ENST00000577887 78 ntBASIC1.83□□□□□ -2.12
CTR9Q6PD62 BX248123.2-201ENST00000606318 124 ntBASIC1.83□□□□□ -2.12
CTR9Q6PD62 MTND4LP32-201ENST00000636111 270 ntBASIC1.83□□□□□ -2.12
CTR9Q6PD62 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CTR9Q6PD62 Y_RNA.70-201ENST00000362886 110 ntBASIC1.82□□□□□ -2.12
CTR9Q6PD62 RNU6-418P-201ENST00000384035 107 ntBASIC1.82□□□□□ -2.12
CTR9Q6PD62 RNU6-1297P-201ENST00000384415 104 ntBASIC1.82□□□□□ -2.12
CTR9Q6PD62 MIR586-201ENST00000385035 97 ntBASIC1.82□□□□□ -2.12
CTR9Q6PD62 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CTR9Q6PD62 RNU1-139P-201ENST00000391307 165 ntBASIC1.82□□□□□ -2.12
CTR9Q6PD62 SNORA75.6-201ENST00000391318 127 ntBASIC1.82□□□□□ -2.12
CTR9Q6PD62 MIR320B2-201ENST00000408479 138 ntBASIC1.82□□□□□ -2.12
CTR9Q6PD62 RN7SKP51-201ENST00000410781 304 ntBASIC1.82□□□□□ -2.12
CTR9Q6PD62 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CTR9Q6PD62 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.82□□□□□ -2.12
CTR9Q6PD62 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.82□□□□□ -2.12
CTR9Q6PD62 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.82□□□□□ -2.12
CTR9Q6PD62 RPL17P19-201ENST00000489069 552 ntBASIC1.82□□□□□ -2.12
CTR9Q6PD62 AC008834.1-201ENST00000511612 175 ntBASIC1.82□□□□□ -2.12
CTR9Q6PD62 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.82□□□□□ -2.12
CTR9Q6PD62 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.82□□□□□ -2.12
CTR9Q6PD62 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.82□□□□□ -2.12
CTR9Q6PD62 MIR5690-201ENST00000583739 73 ntBASIC1.82□□□□□ -2.12
CTR9Q6PD62 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.82□□□□□ -2.12
CTR9Q6PD62 AC008873.1-201ENST00000625051 138 ntBASIC1.82□□□□□ -2.12
CTR9Q6PD62 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
CTR9Q6PD62 MTND5P16-201ENST00000460269 1703 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 RNU1-62P-201ENST00000362599 164 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 Y_RNA.132-201ENST00000363421 102 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 RNU6-890P-201ENST00000384121 107 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 RNU6-281P-201ENST00000384212 103 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 RNU6-975P-201ENST00000384296 105 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 RNU6-700P-201ENST00000391043 107 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 RNA5SP501-201ENST00000410990 112 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.81□□□□□ -2.12
CTR9Q6PD62 AP1B1P2-201ENST00000416196 106 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 MTND4LP11-201ENST00000422184 280 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 MTCYBP10-201ENST00000424905 650 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 AC093019.1-201ENST00000443135 252 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 AC016717.1-201ENST00000448918 286 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 AC091179.3-201ENST00000474761 144 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 AC067942.3-201ENST00000512025 362 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.81□□□□□ -2.12
CTR9Q6PD62 RNU6-1114P-201ENST00000516022 107 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 RNU6-307P-201ENST00000516743 106 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.81□□□□□ -2.12
CTR9Q6PD62 AK6P2-201ENST00000549020 471 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.81□□□□□ -2.12
CTR9Q6PD62 MIR4753-201ENST00000585119 83 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 AL359697.1-201ENST00000624879 587 ntBASIC1.81□□□□□ -2.12
CTR9Q6PD62 AC112487.2-201ENST00000637950 304 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms