Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC022695.1-201ENST00000522089 237 ntBASIC4.03□□□□□ -1.76
PTCRAQ6ISU1 AC068339.1-201ENST00000526965 141 ntBASIC4.03□□□□□ -1.76
PTCRAQ6ISU1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.03□□□□□ -1.76
PTCRAQ6ISU1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.03□□□□□ -1.76
PTCRAQ6ISU1 AC140113.4-201ENST00000622087 222 ntBASIC4.03□□□□□ -1.76
PTCRAQ6ISU1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PTCRAQ6ISU1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 SNORA38.1-201ENST00000364172 131 ntBASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 RNU6-438P-201ENST00000365561 103 ntBASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 RNU6-573P-201ENST00000383938 106 ntBASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 RNU11-5P-201ENST00000391216 129 ntBASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 AL513477.1-202ENST00000417061 214 ntBASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 Z98742.2-201ENST00000431564 187 ntBASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 AC109327.2-201ENST00000448339 378 ntBASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 NDUFA4P2-201ENST00000489989 244 ntBASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 RNU6-1146P-201ENST00000516282 102 ntBASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 RN7SKP83-201ENST00000516512 178 ntBASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 RN7SKP282-201ENST00000516824 299 ntBASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 AC103810.1-201ENST00000579873 453 ntBASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 SNORD115-40-201ENST00000606510 82 ntBASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.02□□□□□ -1.77
PTCRAQ6ISU1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 LINC01355-201ENST00000566551 5444 ntBASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 SNORD77.3-201ENST00000391113 65 ntBASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 AL117342.1-201ENST00000404861 406 ntBASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 RNA5SP104-201ENST00000410989 118 ntBASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 SNORD105B-201ENST00000458770 79 ntBASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 RNU6-109P-201ENST00000516364 107 ntBASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 RNU6-184P-201ENST00000516514 107 ntBASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 MIR8057-201ENST00000620957 69 ntBASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PTCRAQ6ISU1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4□□□□□ -1.77
PTCRAQ6ISU1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4□□□□□ -1.77
PTCRAQ6ISU1 NEAT1-202ENST00000501122 22743 ntBASIC4□□□□□ -1.77
PTCRAQ6ISU1 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4□□□□□ -1.77
PTCRAQ6ISU1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTCRAQ6ISU1 AC092435.4-201ENST00000623012 4159 ntBASIC4□□□□□ -1.77
PTCRAQ6ISU1 Y_RNA.219-201ENST00000364232 113 ntBASIC4□□□□□ -1.77
PTCRAQ6ISU1 RNY1P7-201ENST00000384743 110 ntBASIC4□□□□□ -1.77
PTCRAQ6ISU1 HSPE1P26-201ENST00000405341 275 ntBASIC4□□□□□ -1.77
PTCRAQ6ISU1 HMGN1P7-201ENST00000491722 313 ntBASIC4□□□□□ -1.77
PTCRAQ6ISU1 RNA5SP112-201ENST00000515937 99 ntBASIC4□□□□□ -1.77
PTCRAQ6ISU1 RNU6-693P-201ENST00000516134 107 ntBASIC4□□□□□ -1.77
PTCRAQ6ISU1 RNA5SP164-201ENST00000516533 110 ntBASIC4□□□□□ -1.77
PTCRAQ6ISU1 RNU6-1096P-201ENST00000517089 102 ntBASIC4□□□□□ -1.77
PTCRAQ6ISU1 RNU6-1270P-201ENST00000517128 108 ntBASIC4□□□□□ -1.77
PTCRAQ6ISU1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4□□□□□ -1.77
PTCRAQ6ISU1 AC015726.2-201ENST00000620112 122 ntBASIC4□□□□□ -1.77
PTCRAQ6ISU1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4□□□□□ -1.77
PTCRAQ6ISU1 MFSD8-236ENST00000641509 4050 ntBASIC4□□□□□ -1.77
PTCRAQ6ISU1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 MIR302B-201ENST00000362188 73 ntBASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 Y_RNA.93-201ENST00000363066 109 ntBASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 RNU6-414P-201ENST00000363705 104 ntBASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 RN7SKP167-201ENST00000411047 285 ntBASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 RNU2-32P-201ENST00000411193 191 ntBASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 AC084364.2-201ENST00000546924 395 ntBASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 AC069240.1-201ENST00000548774 375 ntBASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 MIR4765-201ENST00000585007 77 ntBASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 AC087685.1-201ENST00000587507 141 ntBASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 AC025521.1-201ENST00000621624 286 ntBASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 MIR7702-201ENST00000621931 59 ntBASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTCRAQ6ISU1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.98□□□□□ -1.77
PTCRAQ6ISU1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PTCRAQ6ISU1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.98□□□□□ -1.77
PTCRAQ6ISU1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTCRAQ6ISU1 HDGFP1-201ENST00000405943 252 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms